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Information for unigene UN14400
| FASTA Sequence |
| Unigene ID: UN14400 | Length: 1220 |
| SNP | GGGGTAACAGTAACACGTTTAGTATAATAATAACTAAATAATAATCTCCGGCTCCAGGTTCAGCTGCGTCGACGAGATCCGTCGTT
ACGATCTCAGATTTGATACTCCGGCGACATGAGTTCTCCGGGAGCGAGTATGTTCACAAATTTCACCAAGCTCTGCAAAGGACTCG
CTCTCGTGCTTGTGGTCGGCCACGTCTTGGTTCACTTCGTTCCCTCCACCGTCACGTACCTCGCTCTCATCCCAGCGAGGACTATT
CCATTTGGGTGGAATCTGATTACAAGCGGCTATTTTGAACTCTCAGTATATGGTGTTGTCTTCAGCGTTGTTTCTCTCCTCTTTAT
GGGAAAGTTCCTTGAACCTGTCTGGGGTTCCAAGGAGTTCCTTAAGTTCATCTTCGTCGTCAACTTCCTTACCTATCTCTGCGTTT
TCGTCACAGCCATTGCTTTGTACTACATTACCAGGCTCGAAATCTACCTATATATGCCCTTCGCAGGTTTTCATGGTGTCTTGGCA
GGCCTTCTTGTTGGGATTAAGCAGATAATACCTGACCAGGAGGTACTACTCGTAAAGATAAAAGCAAAGTGGTTGCCCTCTATTAT
GCTAGTTTTGTCAATAGCCTCAAGCTTCTTCACACTAAACTCAGCAGCATACCTTCCCACTTTGATTTTTGGTACGTATATGGGCT
GGTTATACCTCAGATACTTGCAGAGGAGGCCAGAGACAAAGCTCAGAGGTGATCCGAGTGACGACTTTGCCTTCTCCACTTTCTTT
CCTGAATTCCTCAGACCGATTATTGATCCTATAGCCTCAATATTTCATCGGATGCTTTGTGGACGATCAAATGCGACCAGCGAAGA
CCATGGTTATACTACCAGCGGTGCTCCATTACCCGGCTCTGACTCTGCTGAAGCTTCCAGGAGGAGAGAAAGAGGAGCAAGAGCTC
TAGAGGAGAGACTTGCAACGGAAAGGTTAGTTCCTCCAAGGAACAAAGATGAGTTGCAGAGTGATGCTTTGGATAGCGTTTAAGTG
GTGGAGACTGCAACTAGTTTTGTTGAAGAAGTTGTGTGGGTTCTTGTTTTTTTCTTCTTTTTCTGTTTGTTTATGAAATTGGTTTT
ATACAGACAGAACCGATCAGCTTCTGCGTAAATTCTTATGACAGCTAAAAAAAATTAGTGCATTTTCTTAACCAGTTAGAAACAAA
TTTCCTTGGACGAGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882562 hypothetical protein ARALYDRAFT_896969 [Arabidopsis lyrata subsp. lyrata] | 1492 | 3e-163 |
| NP_566326 rhomboid protein-like protein [Arabidopsis thaliana] | 1465 | 4e-160 |
| AAF21205 unknown protein [Arabidopsis thaliana] | 1445 | 9e-158 |
| XP_002533249 Transmembrane protein, putative [Ricinus communis] | 1184 | 2e-127 |
| XP_002275709 PREDICTED: hypothetical protein [Vitis vinifera] | 1147 | 3e-123 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q12893 Transmembrane protein 115 | 340 | 5e-031 |
| Q9WUH1 Transmembrane protein 115 | 337 | 1e-030 |
| A4FUB8 Transmembrane protein 115 | 331 | 6e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LF05 At3g07950 | 1465 | 3e-160 |
| Q9SFB9 F17A17.29 protein | 1445 | 6e-158 |
| B9T4T0 Transmembrane protein, putative | 1184 | 1e-127 |
| A9PE89 Putative uncharacterized protein | 1124 | 1e-120 |
| B9HUD8 Putative uncharacterized protein | 1085 | 3e-116 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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