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Information for unigene UN14623

FASTA Sequence
Unigene ID: UN14623Length: 1387 SSRSNP
TTTTTAATAAAACTAGTTTAATAAAACTAGTAATAACAATTTTCATATATATATATTATTATTTTGCTTTCTTTTATCTTAAAAAA
ATAAAAAATAAAAAATAAAATAAGAGATGGGTTACATTTTTCTGACCATGATTGCGTTTCTTGTTATTTTTGCCTTACCGGCGGTT
GTCGCCAACGATATAACTCCGATTCCAGAAGACAAAGGCCAAGTCGAGGCATGGTTCAAGGCCAACGTTCAACCCTATTCAGCGAG
GCGAGGCACACTCGACCCTGCCCTGGATGCAGCTGAAGCATCGCCACAGATTATTACCGTGAATCAAGGAGGAGGCGGCGATTTTA
AGACAATAAATGAAGCGATCAAGAGCATTCCGACAGGGAACACAAAGCGTGTGATCATCAAGTTGGCTCCTGGTGTATACCGTGAG
AAAGTCACAATCGACGTAGGTCGACCATTCATTACATTGATGGGTAAACCTGGTGCAGAAACGACCTTGACCTTCGACGGGACGGC
CTCTAAATTCGGAACCATGGAGAGTGCGACGCTTATCGTCTGGGCCCAATATTTTGTGGCAGCCAACTTACACATTAGAAATACTG
CTCCAATGCCGAAAGCAGGATCACAAGGACAAGCGCTCGCTATGAGGATCAACGGCGATAAAGCGGCTTTCTACAACTGCAGATTC
TATGGTTTCCAAGACACTCTTTGTGATGATATAGGCAACCATTTCTTCAAGGACTGTTACATCGAGGGAACCTATGATTTTATCTT
CGGAAGAGGAGCTTCCCTGTACTTGAACACGCAATTGCACGCTGTTGGAGATGGATTAAGAGTGATCACAGCACACAATCGACAGA
GTGAGAACCAGCAGAATGGGTATTCATTCGTGCATTGCAAGATTACTGGAGTTGGAACGGGGATCTACTTGGGTAGGGCATGGATG
AGCCACCCTAAGGTCGTCTATGCCTACACTGAGATGTCCAGTGTCGTCAACCCAACCGGATGGCAAGAGAACAAGAACCGCGCCCA
TGACAAGACGGTGTTCTATGGAGAATACATGTGTACGGGACCAGGATCACACAAAGAGAAGAGAGTGGCCCACACACAAGACATTG
ACAAAAACGAAGCTAACAGTTTCCTTACCCTCGGCTACATCAAAGGCTCATTGTGGCTCCTCCCTCCTCCCACTTACTAAACCACA
CCCATCTCATAACTATTATTCTATACTTTTGACTGAAAATACATGTGTATAAATGTATGTCTTGCATGCATTATTTCTTCTTGAAT
TTATTTCGAAAGTCCTCTCTTTCTGTATGTAATGGAAGAGTAGAGACTTGTGTAATTTTGGTTGCACTATAATAAAATACATCAAT
ATTCATAACTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871270 pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]16197e-178
NP_196359 putative pectinesterase 49 [Arabidopsis thaliana]15911e-174
XP_002871271 pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]15605e-171
NP_196360 putative pectinesterase 50 [Arabidopsis thaliana]15533e-170
XP_002871269 ATPPME1 [Arabidopsis lyrata subsp. lyrata]13421e-145

Swiss-Prot top hits (Blast detail)Scoree value
Q9LY18 Probable pectinesterase 4915915e-176
Q9LY17 Probable pectinesterase 5015531e-171
Q84WM7 Pectinesterase PPME113254e-145
Q9LY19 Probable pectinesterase 4813075e-143
Q9FKF3 Putative pectinesterase 6311345e-123

TrEMBL top hits (Blast detail)Scoree value
B9SW55 Pectinesterase10353e-110
B9I449 Pectinesterase10139e-108
B9RA20 Pectinesterase10112e-107
B9HAS7 Pectinesterase10075e-107
B9NDW1 Pectinesterase9994e-106

Arabidopsis top hits (Blast detail)Scoree value
AT5G07420.1 pectinesterase family protein15924e-177
AT5G07430.1 pectinesterase family protein15549e-173
AT1G69940.1 PPME1; pectinesterase13253e-146
AT5G07410.1 pectinesterase family protein13074e-144
AT5G61680.1 pectinesterase family protein11354e-124

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  18%
 
73  11%
 
108  29%
 
84  14%
 
112  7%
 
95  18%
 
121  4%

Unigene MembersMember information