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Information for unigene UN14657
| FASTA Sequence |
| Unigene ID: UN14657 | Length: 1826 |
SSR | SNP | AATAAGATTACAAACAGACTGAAACACTTCCTAAATAATATTCAAAAGAGATCAGAAATATTCGATTAAAAGAATAATTTGCCAAA
TCTTTTCTCTCAACACCAAAAGAACAAAACAAATAGACAAGACAACAAACTTCTTCTATATCTACAACACATTCTTGCAAAAATAA
CATTCACGTAAACAAAATTAAATCTTTTTTTCTTGTATCAACGTTTAATGAACACAATGAAAGGAGTCTTTAAGAGGGTAGATAAT
CTCTCTCTCTCTCTCTCTCTCTTACCTCTCTTGCTCTGTGGGGAACCAACCTTGGATCAAATCACAAGCAGTCCAAACCACATATC
TCGAGAATAGGACCACCTTTAGCCACAAACGGGTTAACCCTTACCCAAAGAAGTGTAAGAATAGAAGCCAGGAGAATAGACCAGAC
GACAATAATGGTCGGCATTCTATCTTGTTTCCCTAGCAAACCTTTAAGGAAAGGGTAAAGATGAATAACCACCCAAAGTGCAAAGA
ACAACCTTCCAAAAAGCGGTCCCCATGAGTCATAACCATTGCTTATAGCATCAGAGATTCCGACCACGATTCCGATGACGTTTATG
ATGAGAAGAGTCGTGGGAGGGATGAGAAGTGAAGTCCATTTGAAGAGGTAAAGGTCTGAGAACTCTCCATCATCAGCTGCCTTTGA
CGTGACCGTGAAGTTAGTGTCCACACCAGCGAGAACCTTGAGAAGACCTTGGAAGAGAGCAAAGAGATGAGCAGAGACACCTCCAA
TGACCCAAAACTGTTCATTTCTCCACCAGTCATCGATCCCAACTTTGCCCCATTGCATCTCCAGAACACCAGTTACTGCAATGGAC
GAGAAGAGTGCCATGAAGAGGATACTCGCATAGTTGCTTATCTCTGGAACAATGAATTTGCCTGTGAGAAGACAGATGGCTGGGAG
GGAACAGTAGACAATGAGAGGGAGAGAGGTCCATGGGTAAACCACAGAGTTGATGTAAGACAACCTCTCAAGCCATTTCAAACCAC
CTCCATAACCATACCAAATAGGACAATGCCTACTCAAGAAAATCTCAACAGACCCAAGCGCCCATCTAAGAACCTGATGAAGACGG
TCCGAAAGATTGATGGGAGCTGATCCTTTGAAAGCTGGCAACTTAGGTGTGCAGTAAACAGACCTCCACCCATGAGAATGCATCTT
GAAACCAGTGAGAATATCTTCCGTAACAGAACCGTAGATCCACCCAATCTCTTTGCCCCACTCGGTTTTATCTTCATACCCACAGC
TAATGACTTGGATAGCTTCTTGAAGCAGACAAGCTGGACTCGCGTTCCTAGCCATCCCACCGTTCTCCATACGAGCAGATGCAACA
AAGACAGGACTCTGTCCGAACTTCTTCTCCAGCTTCAGTTGCATCGCCTCGGTTGATAGTTCTACATTAGACCCTTTAGTAGTGGT
GACGCGGCCCTCTTCAATATTTTCTAACGCATGGATCTGCTTAGAGGCTTCTCTGTTCTTCTTCTTCTTATCAGCAGCAGCTGTCT
TCGCTTTACGGTTCTTTCTCGAACCACAGCAAAGGAAACACCATTTTGGCCAGCAGTTACACGTCTTACGTGGAGCCTTCTTCTTC
TTTGGCGCATCGAACCCGTAAAGCGCTTGTCTCCTGAACACACAACCTGTACCAACGTATATAGGTCCTTGTAACCCATCCAAACC
CTTCATATTGATATCGAAGAAGACAACGTTGCGGTTAGAGTATCGATCGTGCCTATCGATCCCATCGAATCTTTGAGGGAACTGAA
CGTAACAGATTTTTTTCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACS68196 cellulose synthase 6.1 catalytic subunit [Brassica napus] | 2663 | 9e-299 |
| XP_002862432 predicted protein [Arabidopsis lyrata subsp. lyrata] | 2629 | 8e-295 |
| NP_201279 cellulose synthase A catalytic subunit 6 [UDP-forming] [Arabidopsis thaliana] | 2610 | 1e-292 |
| XP_002864919 hypothetical protein ARALYDRAFT_496689 [Arabidopsis lyrata subsp. lyrata] | 2605 | 5e-292 |
| AAC29067 cellulose synthase [Arabidopsis thaliana] | 2548 | 2e-285 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94JQ6 Cellulose synthase A catalytic subunit 6 [UDP-forming] | 2610 | 5e-294 |
| Q8L778 Cellulose synthase A catalytic subunit 5 [UDP-forming] | 2482 | 4e-279 |
| O48947 Cellulose synthase A catalytic subunit 2 [UDP-forming] | 2396 | 3e-269 |
| Q9SJ22 Probable cellulose synthase A catalytic subunit 9 [UDP-forming] | 2326 | 5e-261 |
| Q6YVM4 Probable cellulose synthase A catalytic subunit 6 [UDP-forming] | 2073 | 1e-231 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T5I4 Cellulose synthase A catalytic subunit 6 [UDP-forming], putative | 2383 | 2e-266 |
| B9HGC9 Predicted protein | 2380 | 4e-266 |
| B9HGD0 Predicted protein (Fragment) | 2380 | 4e-266 |
| B9H5M9 Putative uncharacterized protein | 2336 | 5e-261 |
| Q6YBV3 Cellulose synthase | 2324 | 1e-259 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G64740.1 CESA6 (CELLULOSE SYNTHASE 6); cellulose synthase/ transferase, transferring glycosyl groups | 2611 | 4e-295 |
| AT5G09870.1 CESA5 (CELLULOSE SYNTHASE 5); cellulose synthase/ transferase, transferring glycosyl groups | 2483 | 2e-280 |
| AT4G39350.1 CESA2 (CELLULOSE SYNTHASE A2); cellulose synthase/ transferase, transferring glycosyl groups | 2396 | 3e-270 |
| AT2G21770.1 CESA9 (CELLULOSE SYNTHASE A9); cellulose synthase/ transferase, transferring glycosyl groups | 2326 | 4e-262 |
| AT5G05170.1 CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1); cellulose synthase/ transferase, transferring glycosyl groups | 1830 | 1e-204 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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