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Information for unigene UN14778

FASTA Sequence
Unigene ID: UN14778Length: 1138  SNP
GGAATTTAAGATGCGATAGATTTATTAAAGTGCTCCAACATATAATCCGAAACTGGATTTAAGAACATAATAATATCCAAGGAAAC
AAAATTGAAAATTCTAAAACTTCAACGAACAGAAGACGATAACAAAAAAGAAAGAAACAGTTTGATAGATGTCTAAAGAGTGATCC
AAAGGACAGGAAAAGGAAAGGAGAATGACACTTATTGAAGTGGGGAGGAAACTTGCATTCATTCTTGGACGACTTCTTCAGTGACG
TCAATAACATCCTCAAACTCAACTTCTTTGACTTCTTTGGCTTCATCCTCTTCTTCTTCCTCATCACTGATTTCTCCATCCCTGAG
GTTTTGCCTCGCAAGTTTCTCCTCTTCCTGCAGCGACTTCCACTGCTTCACCCATTTCTCCCACTCTTCCTTCAACGCCTTCCTCT
TCTCCCTGTCTTGTTCACTCAAGAGCAACGACACGTCCTGATCCTCTAACTCGTACTTCTTGCTGTACTTCTTCAGGTTCTTTGCT
ATCTCTTCTTCCTTCTCTGGAGACAAGAATGATGGAGGTCTTGGGCGCCATGCCAACTGGAAGAAATGATCCTTCAGATTCCGGTA
AAGCAATTTTCCATTGAACGACCAGATGGTGAATCCATTCTCCATCTCATGGACTGACGTCACTGCTGTTGCAACATACCTTCCAG
TTGGGTCCCATTCGATATCAGTGGCCATGAAGTGTTCAGTTGTGGCCATCGTCTCGAGCTCATCCACGTTGAAAAATTCAAGCTGG
CCGTTGAAGTTCTTCAACCCAGCAAGAATAATGTACTTGCCTGTGGGAGACCAGAAGAGGGCATTGGCTTGTTTGGCTTTCAAAGT
ACCGAGCTTTGTAACCCTTCCACCGTGTTGCGTGGTCTTCATCGTGTAGAAACTCACATCTGGTCTTGGTTGGTCACCGTGAATCA
CAGCAAACCTGTGACCCTTGGGCTCCCACGCGAAAGCGATGATCTTGTCGTTCTTGTTGTCCAGCTCGAGAACCTCGATGGGAATA
TCCCTCTCTTTGATACGGAAGAGCCCGAAGCCAGAGTACGTGCTCTTCTTCGTCTTTGTGTAACGGTCAACCTTGACGGCGAGATA
CTCTCCACTACTCTGCCAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874327 hypothetical protein ARALYDRAFT_351685 [Arabidopsis lyrata subsp. lyrata]14296e-156
XP_002872264 TIF3B1 [Arabidopsis lyrata subsp. lyrata]14271e-155
XP_002874283 TIF3B1 [Arabidopsis lyrata subsp. lyrata]14207e-155
NP_568498 translation initiation factor 3 subunit B [Arabidopsis thaliana]14162e-154
NP_001031954 translation initiation factor 3 subunit B [Arabidopsis thaliana]14162e-154

Swiss-Prot top hits (Blast detail)Scoree value
Q9C5Z1 Eukaryotic translation initiation factor 3 subunit B14168e-156
P56821 Eukaryotic translation initiation factor 3 subunit B11595e-126
A7MB16 Eukaryotic translation initiation factor 3 subunit B6595e-068
P55884 Eukaryotic translation initiation factor 3 subunit B6561e-067
Q8JZQ9 Eukaryotic translation initiation factor 3 subunit B6462e-066

TrEMBL top hits (Blast detail)Scoree value
Q2V341 Putative uncharacterized protein At5g27640.214161e-154
Q8GUM1 Eukaryotic translation initiation factor-like protein13911e-151
A5BDZ1 Putative uncharacterized protein13149e-143
B9HB90 Predicted protein12889e-140
B9RNS0 Eukaryotic translation initiation factor 3 subunit, putative12833e-139

Arabidopsis top hits (Blast detail)Scoree value
AT5G27640.1 TIF3B1 (TRANSLATION INITIATION FACTOR 3B1); nucleic acid binding / translation initiation factor14265e-158
AT5G27640.2 TIF3B1 (TRANSLATION INITIATION FACTOR 3B1); nucleic acid binding / translation initiation factor14265e-158
AT5G25780.1 EIF3B-2 (EUKARYOTIC TRANSLATION INITIATION FACTOR 3B-2); nucleic acid binding / protein binding / translation initiation factor13971e-154
AT1G49015.1 eukaryotic translation initiation factor-related2949e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  10%
 
103  30%
 
93  30%
 
181  10%
 
191  10%
 
61  10%

Unigene MembersMember information