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Information for unigene UN15140
| FASTA Sequence |
| Unigene ID: UN15140 | Length: 1537 |
| SNP | GTTCGCTTCTCCTTTCACTCTCTTCCTCCACTCTCCTCCTCCTTCCTCTCTCATCTCTAACGGATCCTCCTTCAATCCCTCTCCAC
GATCGATCTCTCTCCACCCTATCCGATCCACACGCTGCTTTCGGATCCTCTCGAAGCTTCCGCTAGACGACACCGTAGGAGACGAC
TATGCTCCTCTTCTCCCGCCGCGGCTATCCGCCGCCGTCAAGCCTTTCCTTCTCCTCTGCACCTCCGTCGCTCTGTCGTTCTCGCT
GTTCGCCGCTTCTCCCGCCGTCGAATCCGCCGCCGCGTTCGTCGTCACCACTCCGCGGAAGCTCCAGACGGACGAACTCGCGACGG
TTCGGTTGTTCCAGGAGAACACTCCTTCCGTCGTCTACATCACTAATCTCGCCGTGAGGCAGGACGCGTTTACATTGGACGTGCTT
GAGGTGCCGCAAGGGTCTGGTTCAGGATTCGTGTGGGATAAGCAGGGTCACATTGTTACCAATTATCATGTCATCCGTGGTGCTTC
CGATCTCAGGGTCACTCTGGCTGACCAATCGACATATGATGCCAAAGTTGTTGGATTCGACCAAGACAAGGATGTTGCTGTTCTAC
GTATCGAGGCACCAAAAGACAAGCTAAGGCCTATACCTGTTGGAGTCTCTGCCGATCTTCTCGTCGGCCAGAAAGTCTTTGCCATT
GGCAATCCTTTTGGACTTGATCATACTCTTACAACTGGTGTTATAAGTGGTTTGCGAAGAGAAATTAGTTCTGCTGCGACCGGTCG
TCCAATCCAAGATGTGATACAAACTGATGCAGCCATTAACCCAGGTAACAGCGGAGGACCGCTTCTAGACAGTTCAGGTACTCTGA
TTGGTATAAACACAGCCATTTATTCTCCTTCTGGTGCATCTTCTGGAGTGGGCTTTTCGATCCCAGTTGACACCGTTGGTGGTATC
GTTGATCAGCTGGTTAGGTTTGGGAAAGTCACAAGACCCATCTTAGGTATCAAATTCGCACCGGACCAATCTGTTGAGCAACTGGG
AGTGAGCGGCGTGCTTGTCTTGGACGCTCCTCCAACTGGTCCAGCTGGAAAAGCCGGACTTCAGTCCACAAAACGTGACGGGTACG
GGAGGTTAATACTTGGAGACATTATCACGTCGGTTAACGGTACAAAAGTTACTAACGGGAGTGATCTGTACCGGATTCTTGATCAG
TGCAAAGTCGGTGATGAGGTGACCGTAGAGGTTCTAAGAGGAGATCACAAGGAGAAGATCTCTGTAACTCTCGAACCAAAACCGGA
CGAGACTTAAGAAAGTTGTGGAAAGAAAGTAAATATAACGGTAGAACAAACAAAACCGGTGGGCTTATTCTTGTATATCAATTGTT
CGGAATGTAGATCGTCCAGTTGTGTAAAAGACAAATCTGTTTATATTTGCATAGCCGGTCTTATGGTTTGGATTGGTATTGATCCT
CGGTTTAGACTTTTCGACCATAACCGGTCTAAACCCTCAATAGATTTCTTAATCACAGACCCCCGGTCTTATAGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAC39436 DegP protease precursor [Arabidopsis thaliana] | 1911 | 1e-211 |
| NP_189431 protease Do-like 1 [Arabidopsis thaliana] | 1901 | 2e-210 |
| XP_002877082 hypothetical protein ARALYDRAFT_484581 [Arabidopsis lyrata subsp. lyrata] | 1890 | 3e-209 |
| 3QO6 Chain A, Crystal Structure Analysis Of The Plant Protease Deg1 | 1663 | 7e-183 |
| XP_002267510 PREDICTED: hypothetical protein [Vitis vinifera] | 1659 | 2e-182 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O22609 Protease Do-like 1, chloroplastic | 1901 | 7e-212 |
| Q9LU10 Protease Do-like 8, chloroplastic | 627 | 4e-064 |
| Q2YMX6 Probable serine protease do-like | 520 | 1e-051 |
| P0C114 Probable serine protease do-like | 520 | 1e-051 |
| Q8YG32 Probable serine protease do-like | 520 | 1e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D2DWB6 Serine-type peptidase | 1652 | 9e-182 |
| B9SF71 Protease degQ, putative | 1640 | 2e-180 |
| A9PI52 Putative uncharacterized protein | 1631 | 2e-179 |
| B9GHR2 Predicted protein (Fragment) | 1631 | 2e-179 |
| C6TGH8 Putative uncharacterized protein | 1629 | 4e-179 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G27925.1 DEGP1 (DegP protease 1); serine-type endopeptidase/ serine-type peptidase | 1902 | 5e-213 |
| AT5G39830.1 DEG8; peptidase/ serine-type peptidase | 627 | 3e-065 |
| AT4G18370.1 DEG5 (DEGP PROTEASE 5); catalytic/ serine-type endopeptidase/ serine-type peptidase | 376 | 4e-036 |
| AT5G39830.2 DEG8; peptidase/ serine-type peptidase | 357 | 7e-034 |
| AT5G27660.1 catalytic/ protein binding / serine-type endopeptidase/ serine-type peptidase | 324 | 5e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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