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Information for unigene UN15765
| FASTA Sequence |
| Unigene ID: UN15765 | Length: 1351 |
| SNP | CGGGTGATTTCGACCCTTGGATCGAAAACCATGAGCAACGTTACCGCCGATCCCACTACCGACGGTCCTTCCACCGCCGTCGTCGC
AGAGTCCGCAGTCGAGAGTTCTCCTCCGACTGATCGTCCCGTCCGCGTCTACGCCGATGGGATCTACGATCTTTTCCACTTCGGCC
ACGCTCGATCTCTCGAACAAGCCAAAAAATCGTTTCCAAACACGTACCTTCTCGTTGGATGTTGCAACGATGAGACTACTCATAAG
TACAAGGGAAGGACTGTTATGACTGCTGAAGAGCGTTATGAATCACTCCGTCACTGCAAGTGGGTGGATGAAGTTATTCCGGATGC
ACCATGGGTGATCAACCAAGAGTTTCTTGATAACCACCGCATTGACTATGTTGCCCATGATTCCCTTCCGTATGCTGACACCAGCG
GAGCTGGAAAGGATGTCTATGAATTTGTTAAGAAAGTTGGGAGGTTTAAGGAAACAATGCGAACTGAAGGGATATCAACTTCGGAT
ATTATTATGAGAATAGTGAAAGATTACAACCAGTATGTCATGCGTAACCTGGATAGAGGTTATTCCAGGGAAGATCTTGGAGTTAG
CTTTGTCAAGGAAAAGAGACTTAGAGTTAATATGAGGCTAAAGAAACTCCAGGAGAGAGTCAAAGAACAGCAAGAAAAAGTTGGAG
AAAAGATTCAAACCGTAAAAATGCTGCGCAACGAGTGGGTAGAGAATGCAGATCGGTGGGTCGCTGGATTTCTGGAAATATTTGAA
GAAGGTTGCCATAAGATGGGGACTGCAATCAGAGATAGTATCCAAGAGAGGTTAATCAGACAAATTCCCAGAAACAAGCTGGAGAA
CGGTCAGGATGATGACACAGACGATCAGTTCTATGAAGAATATTTCGACCATGACATGGGCAGTGACGAGGATGAAGAGGAACGAT
ACTATGACGAGGAGGAAGATGTTGAAGAAGAGAAAGAGAAAACCATTAAGACAGATGCAAAAGACAAGTAGTAAGAACAAATTTGT
CTCTCAGAACCCTAAGTTTAGCCTCTGACTCTATCTCCCTCCCTGGCTCTCTCTCTTTCTCTCTCAGTAATATGCATCTCCTTAAC
ATATAATACCAAATGTTTAGAAAGGGGGTGTGTGAGTGTGATGTGTGTGTCTTTTAAAAAAATTCGAACGTGCGTGCTTGTCTTTG
GTAAATTGTCTCATCGTTTATGTTTGTATAAGCATGTTTTTTTCGATACTTGGTTTTGGGATCTTGATGTATCTAATGTTTAATCA
TTGGTTTTTTTTTCTCTTTGTATAACGGGCAAGTGTTGTGAAGTGATAGTGCAATGGTGTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAA09642 CTP:phosphocholine cytidylyltransferase [Brassica napus] | 1669 | 1e-183 |
| BAA09571 CTP:phosphocholine cytidylyltransferase [Brassica napus] | 1646 | 5e-181 |
| XP_002879376 CTP:phosphocholine cytidylyltransferase [Arabidopsis lyrata subsp. lyrata] | 1545 | 3e-169 |
| NP_180785 phosphorylcholine cytidylyltransferase [Arabidopsis thaliana] | 1538 | 2e-168 |
| AAA93035 CTP:phosphocholine cytidylyltransferase [Arabidopsis thaliana] | 1465 | 5e-160 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9Y5K3 Choline-phosphate cytidylyltransferase B | 659 | 6e-068 |
| Q811Q9 Choline-phosphate cytidylyltransferase B | 656 | 1e-067 |
| Q9QZC4 Choline-phosphate cytidylyltransferase B | 656 | 1e-067 |
| P19836 Choline-phosphate cytidylyltransferase A | 646 | 2e-066 |
| P49585 Choline-phosphate cytidylyltransferase A | 645 | 3e-066 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q42619 CTP:phosphocholine cytidylyltransferase | 1669 | 8e-184 |
| Q42620 CTP:phosphocholine cytidylyltransferase | 1646 | 4e-181 |
| Q9ZV56 CTP:phosphocholine cytidylyltransferase | 1538 | 1e-168 |
| Q42555 CTP:phosphocholine cytidylyltransferase | 1465 | 3e-160 |
| Q42622 CTP:phosphocholine cytidylyltransferase | 1361 | 4e-148 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G32260.1 cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putative | 1538 | 7e-171 |
| AT4G15130.1 catalytic/ choline-phosphate cytidylyltransferase/ nucleotidyltransferase | 1095 | 2e-119 |
| AT2G38670.1 PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1); ethanolamine-phosphate cytidylyltransferase | 278 | 8e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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