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Information for unigene UN15765
FASTA Sequence |
Unigene ID: UN15765 | Length: 1351 |
| SNP | CGGGTGATTTCGACCCTTGGATCGAAAACCATGAGCAACGTTACCGCCGATCCCACTACCGACGGTCCTTCCACCGCCGTCGTCGC
AGAGTCCGCAGTCGAGAGTTCTCCTCCGACTGATCGTCCCGTCCGCGTCTACGCCGATGGGATCTACGATCTTTTCCACTTCGGCC
ACGCTCGATCTCTCGAACAAGCCAAAAAATCGTTTCCAAACACGTACCTTCTCGTTGGATGTTGCAACGATGAGACTACTCATAAG
TACAAGGGAAGGACTGTTATGACTGCTGAAGAGCGTTATGAATCACTCCGTCACTGCAAGTGGGTGGATGAAGTTATTCCGGATGC
ACCATGGGTGATCAACCAAGAGTTTCTTGATAACCACCGCATTGACTATGTTGCCCATGATTCCCTTCCGTATGCTGACACCAGCG
GAGCTGGAAAGGATGTCTATGAATTTGTTAAGAAAGTTGGGAGGTTTAAGGAAACAATGCGAACTGAAGGGATATCAACTTCGGAT
ATTATTATGAGAATAGTGAAAGATTACAACCAGTATGTCATGCGTAACCTGGATAGAGGTTATTCCAGGGAAGATCTTGGAGTTAG
CTTTGTCAAGGAAAAGAGACTTAGAGTTAATATGAGGCTAAAGAAACTCCAGGAGAGAGTCAAAGAACAGCAAGAAAAAGTTGGAG
AAAAGATTCAAACCGTAAAAATGCTGCGCAACGAGTGGGTAGAGAATGCAGATCGGTGGGTCGCTGGATTTCTGGAAATATTTGAA
GAAGGTTGCCATAAGATGGGGACTGCAATCAGAGATAGTATCCAAGAGAGGTTAATCAGACAAATTCCCAGAAACAAGCTGGAGAA
CGGTCAGGATGATGACACAGACGATCAGTTCTATGAAGAATATTTCGACCATGACATGGGCAGTGACGAGGATGAAGAGGAACGAT
ACTATGACGAGGAGGAAGATGTTGAAGAAGAGAAAGAGAAAACCATTAAGACAGATGCAAAAGACAAGTAGTAAGAACAAATTTGT
CTCTCAGAACCCTAAGTTTAGCCTCTGACTCTATCTCCCTCCCTGGCTCTCTCTCTTTCTCTCTCAGTAATATGCATCTCCTTAAC
ATATAATACCAAATGTTTAGAAAGGGGGTGTGTGAGTGTGATGTGTGTGTCTTTTAAAAAAATTCGAACGTGCGTGCTTGTCTTTG
GTAAATTGTCTCATCGTTTATGTTTGTATAAGCATGTTTTTTTCGATACTTGGTTTTGGGATCTTGATGTATCTAATGTTTAATCA
TTGGTTTTTTTTTCTCTTTGTATAACGGGCAAGTGTTGTGAAGTGATAGTGCAATGGTGTG
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GenBank top hits (Blast detail) | Score | e value |
BAA09642 CTP:phosphocholine cytidylyltransferase [Brassica napus] | 1669 | 1e-183 |
BAA09571 CTP:phosphocholine cytidylyltransferase [Brassica napus] | 1646 | 5e-181 |
XP_002879376 CTP:phosphocholine cytidylyltransferase [Arabidopsis lyrata subsp. lyrata] | 1545 | 3e-169 |
NP_180785 phosphorylcholine cytidylyltransferase [Arabidopsis thaliana] | 1538 | 2e-168 |
AAA93035 CTP:phosphocholine cytidylyltransferase [Arabidopsis thaliana] | 1465 | 5e-160 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9Y5K3 Choline-phosphate cytidylyltransferase B | 659 | 6e-068 |
Q811Q9 Choline-phosphate cytidylyltransferase B | 656 | 1e-067 |
Q9QZC4 Choline-phosphate cytidylyltransferase B | 656 | 1e-067 |
P19836 Choline-phosphate cytidylyltransferase A | 646 | 2e-066 |
P49585 Choline-phosphate cytidylyltransferase A | 645 | 3e-066 |
TrEMBL top hits (Blast detail) | Score | e value |
Q42619 CTP:phosphocholine cytidylyltransferase | 1669 | 8e-184 |
Q42620 CTP:phosphocholine cytidylyltransferase | 1646 | 4e-181 |
Q9ZV56 CTP:phosphocholine cytidylyltransferase | 1538 | 1e-168 |
Q42555 CTP:phosphocholine cytidylyltransferase | 1465 | 3e-160 |
Q42622 CTP:phosphocholine cytidylyltransferase | 1361 | 4e-148 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G32260.1 cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putative | 1538 | 7e-171 |
AT4G15130.1 catalytic/ choline-phosphate cytidylyltransferase/ nucleotidyltransferase | 1095 | 2e-119 |
AT2G38670.1 PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1); ethanolamine-phosphate cytidylyltransferase | 278 | 8e-025 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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