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Information for unigene UN15773

FASTA Sequence
Unigene ID: UN15773Length: 1565  SNP
AATTCGAAATCTTTAGATGAATTTAAAACATAGTAACTTGTGTTTATAGCTAAAGGCAAAGAAAAACCTGAGGTTAAAAAACAAAT
GTGGGAGATAAATTAAACGAAAACGAAAACATATTTCAAGACGCAACAAAAGGGACAACAAAGATTTAACAAAACCAAACCACTTA
GACAAATTTTAACGAACTAAGTTAAAGATAAGAGAAAGGAAACTGAGAAGTAAATGGGTAAATAATGGGTGTTCACCGGATAACAA
TTTAAATTTCACTGGCAAAGCTGCTCGACGGCTGTCACGATCTGAGCCGGTTGAACCACGGTCCACTCTTCAAGAGTACCAGCATA
AGGTGTAGGAACATCCTGAGAAGACAAACACATCACCGGAGCATCCAAATAGTCATGGAAGTTCTCATTAATGGCAGCCGTAAGAC
TAGCTCCAATCCCACCGGTTCTCATACACTCCTCCACTATCAAAACCCTGTGCGTTTTCTTCACCGAGTTCCCAATCGTGTAAAGA
TCAAACGGTTTCAACGACCTGATGTCGATAACCTCAGGGTCATACCCTTTGTTCACCAGCGTTTTAGCCGCCTGCATCACATGGTA
CCTCATCCGGGAGTAAGTGAGGATGGTAATATGCTCTCCAGGTCTAACCATCTCAGCTTCTTCAAGGTTGCAGATGTATTCTTCGT
CAGGGATCTTCTCCTTGAGATTGTAAAGCAGAACGTGCTCAAACAGAATCACAGGGTTCTCACTTCTTATGGCGGCTTTCATCAAG
CCTTTAGCATTGTAAGGAGTTGAGCAAGCAACCATCTGGATCCCAGGGATGGACTGGAAGTAAGATTCTAGCCGCTGCGAATGCTC
AGCGCCGAGCTGGCGTCCCACTCCACCGGGACCACGGATGACGACTGGGATGGTGAACTGACCACCAGATGTGTAGTGAAGCATTC
CACAGTTGTTTGAGATTTGGTTGAAGGCTAAGAGGAGGAAACCCATGTTCATACCTTCGATGACGGGTCTAAGACCAGTCATGGCG
GCTCCAATGCCCATACCGGTGAAGGCGTTTTCACAAATGGGAGTGTCGAGAACCCTGAGGTCGCCGAATTTATCAGCGAGGCCTTT
GGTAACTTTGTAGGAGCCTCCGTAATGGCCAACGTCTTCGCCCATGACGCATACATGTGGGTCTCTGTCCATCTCTTCTTCTAGAC
CTTCTTGAAGAGCTTCGAAAAGGAGTAGTTCATGTCCAGTACCAGTGGTCGCAGACATGTCAGCCTTCGTCGCGACAGCATTAGGA
ATCAGTTTCTGAGAGTGACGAAGAGTGAGGGTAGAAGAACCAAAGCTCTTACTCGCATCATCATCAGATCCAGCAGCGACAATGCA
TCTCTTGCTCCTCCCTGGAAGATTCGTGCGACAAGGAGCAACGAGTTTCTTGGACTTAAACGTCGTCAAGGCCGCAGCAGCTCCAG
CTCCATGGATTATCGCTGACATTTTCTTGCCACGGAACTCGGGACAGTGAAATTTTGGGCAGTATATATATAGCTATGCAATTACA
AAAGTGTATAAAACAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAB86804 pyruvate dehydrogenase E1 beta subunit [Arabidopsis thaliana]18715e-207
NP_174304 pyruvate dehydrogenase E1 beta [Arabidopsis thaliana]18707e-207
XP_002893601 pyruvate dehydrogenase E1 beta subunit [Arabidopsis lyrata subsp. lyrata]18699e-207
NP_181006 pyruvate dehydrogenase E1 component subunit beta [Arabidopsis thaliana]18662e-206
AAM65328 putative pyruvate dehydrogenase E1 beta subunit [Arabidopsis thaliana]18626e-206

Swiss-Prot top hits (Blast detail)Scoree value
Q32RS0 Pyruvate dehydrogenase E1 component subunit beta13802e-151
Q32RM2 Pyruvate dehydrogenase E1 component subunit beta13722e-150
Q8MA03 Pyruvate dehydrogenase E1 component subunit beta13381e-146
Q1ACL0 Pyruvate dehydrogenase E1 component subunit beta12942e-141
P51266 Pyruvate dehydrogenase E1 component subunit beta12091e-131

TrEMBL top hits (Blast detail)Scoree value
O24458 Pyruvate dehydrogenase E1 beta subunit18714e-207
Q9C6Z3 At1g30120/T2H7_818705e-207
O64688 At2g3459018661e-206
Q8LAI3 Putative pyruvate dehydrogenase E1 beta subunit18624e-206
B9IJS2 Predicted protein17603e-194

Arabidopsis top hits (Blast detail)Scoree value
AT1G30120.1 PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA); pyruvate dehydrogenase (acetyl-transferring)18712e-209
AT2G34590.1 transketolase family protein18676e-209
AT5G50850.1 MAB1 (MACCI-BOU); catalytic/ pyruvate dehydrogenase (acetyl-transferring)6793e-071
AT1G55510.1 BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)/ catalytic5298e-054
AT3G13450.1 DIN4 (DARK INDUCIBLE 4); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)/ catalytic5092e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  6%
 
112  12%
 
102  12%
 
86  35%
 
94  24%
 
121  6%
 
181  6%

Unigene MembersMember information