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Information for unigene UN15975

FASTA Sequence
Unigene ID: UN15975Length: 1314 SSRSNP
GGACAAGTTTCTTATCTTCTACTCCCACTAGATTCTATTCTACAAAAGAAACTTCAATTAGGTTCACAACCTCCACACACTTCCAA
AAACAAGAACCCTAAACTCTAAAGTTTCTTTCTTTCTTCTTCTTCCTTACAGGTTTCTTGTTCTTGAAATTAGGGTTAATTACTTT
TTTTTCCTTCACTTCTCCGGACCTTAAAAATTCAGATCTTTCCTCAGAAAAAAGAGATACCCAACTCGTGTTTTTTGTGTGTGTCT
GAATATAGATAAACGTCACATATATCCATATATTTGAGTGTGTAAAAGAGGAAAAAAAAGAAAAATGGGAAGGGGAAGAGTAGAGC
TGAAGAGGATAGAGAACAAGATCAACCGACAAGTAACGTTTGCGAAGCGTAGGAACGGATTGTTGAAGAAAGCTTACGAATTGTCT
GTTCTTTGCGATGCTGAGGTGGCTCTCATCATCTTCTCCAACCGTGGCAAGCTCTATGAGTTTTGCAGCTCCTCTAACATGATCAA
GACACTGGAACGGTACCAGAAATGCAGTTATGGTTCTATTGAAGTCAACAACAAACCTGCCAAAGAACTTGAGAATAGCTACAGAG
AGTATCTGAAGCTTAAGGGTAGGTATGAGAGCCTTCAGCGCCAACAAAGGAATCTTCTTGGGGAGGATTTAGGACCTCTCAACTCA
AAGGAACTAGAGCAGCTTGAGCGTCAACTAGATGGCTCTCTCAAGCAAGTTCGCTCCATCAAGACACAGTACATGCTTGACCAGCT
CTCTGATCTTCAAAGCAAAGAGCAAATGTTGCTTGAAACCAATAGAGCTTTGGCAATGAAGCTGGATGATATGATTGGTGTGAGAA
GCCATCATATGGGAGGAGGAGGAGGATGGGAAGGCAATGAACAGAATGTTTCGTACGAGCATCATCAAGCTCAGAGTCAAGGACTA
TTCCAGCCTCTTGAATGCAATCCTACTCTGCAGATGGGGTACAACAATCCAGTAGGTTCGGAGCAGATAACTGCAACAACACAAGC
GCAGGCGCAGCCAGGGAACGGTTACATCCCAGGCTGGATGCTCTGAGTGTCCACATTCTGAGAGTCAGTCAATGTGATCAAAACTC
ACCAACAAAAGCTCCGTTTTAAATAATATAAATAGTAGTATAGAACACAAGACTTGGATTTATTTATATAATTAAGTGGCTATGTA
TATTGTCCTAAGGAATCTGCAGGACTTGAGTGTCTTCTGGGAAACCTTGCTACATTTAAGGATTTGAAATGTGTGTGGAACTTTTT
CTGATTATTTAAATTGTCAAAGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568322 developmental protein SEPALLATA 1 [Arabidopsis thaliana]12513e-135
CAD48303 MADS-box protein SEP1-a [Brassica oleracea var. botrytis]12201e-131
XP_002873742 hypothetical protein ARALYDRAFT_909555 [Arabidopsis lyrata subsp. lyrata]12173e-131
AAA32732 transcription factor [Arabidopsis thaliana]12074e-130
ABD96852 hypothetical protein [Cleome spinosa]11152e-119

Swiss-Prot top hits (Blast detail)Scoree value
P29382 Developmental protein SEPALLATA 112511e-136
P29384 Developmental protein SEPALLATA 211023e-119
Q03489 Agamous-like MADS-box protein AGL9 homolog7546e-079
O22456 Developmental protein SEPALLATA 37359e-077
O04067 Agamous-like MADS-box protein AGL9 homolog7341e-076

TrEMBL top hits (Blast detail)Scoree value
Q5XXN8 SEPALLATA112512e-135
Q8GTF1 MADS-box protein SEP1-a12209e-132
Q5XXL8 SEPALLATA112172e-131
Q5XXN7 SEPALLATA112073e-130
Q1KUY4 Putative uncharacterized protein11151e-119

Arabidopsis top hits (Blast detail)Scoree value
AT5G15800.1 SEP1 (SEPALLATA1); DNA binding / transcription factor12529e-138
AT5G15800.2 SEP1 (SEPALLATA1); DNA binding / transcription factor11085e-121
AT3G02310.1 SEP2 (SEPALLATA 2); DNA binding / protein binding / transcription factor11068e-121
AT1G24260.1 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor7375e-078
AT1G24260.2 SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor7375e-078

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  17%
 
181  8%
 
113  25%
 
81  8%
 
101  8%
 
121  8%
 
73  25%

Unigene MembersMember information