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Information for unigene UN15996
| FASTA Sequence |
| Unigene ID: UN15996 | Length: 1624 |
SSR | SNP | GCATCACCTCCCTCTCTGTTCTCAAACTAAATAATCGATCCCTCAATCACTCAACGAACTCTCTCATCTTTCGACCGATCTAAATC
GAAACCCTTTTTATTCTCAAAATAATCTCACTGAGATGAGCTCCGAAACGTCGGCGGCTGGAGACGGCGGCGAAACGAGCGCCGGT
CCATCACCGGCGTACGACAAACAGAAGGAGAAGGCGCGCGTGAGCAGAACGTCTCTGATCCTGTGGCACGCGCACCAGAACGACGC
GGCTGCGGTTCGGAAGCTCCTGGAGGAAGATCCGTCTCTGGTTCACGCCAGAGACTATGACAAGCGAACGCCTCTCCACGTGGCGT
CTCTTCATGGGTGGATCGATGTCGTCAAATGTCTGATCGAGTTTGGTGCTGATGTCAACGCTCAGGACAGGTGGAAGAACACGCCT
CTGGCTGATGCAGAAGGAGCTAGGAAGCAGAAAATGATCGAGCTACTTAAATCTCATGGCGGTTTGTCTTATGGTCAAAACGGGAG
TCACTTTGAACCAAAGCCTGTGCAACCACCAATTCCAAAGAAATGTGACTGGGAAATTGAACCTGCTGAGCTGGATTTCTCTAATG
CAGCCATGATTGGAAAGGGTTCATTTGGTGAGATTTGTGAAAGCCTATTGGAGAGGAACACCAGTTGCTGTCAAACGTATTCTTCC
CTCTCTCTCAGATGATAGACTGGTTATTCAGGACTTCAGGCATGAGGTTGATTTGCTAGTTAAGCTTCGCCATCCCAATATAGTGC
AATTCTTAGGAGCCGTTACCGAGAGAAAGCCCCTTATGTTAATCACTGAATACTTACGCGGGGGAGATCTTCACCAATACCTCAAA
GAAAAGGGTGGTCTTACTCCAGCAACTGCTGTTAACTTTGCCTTGGACATCGCTAGAGGAATGACATATCTTCACAATGAACCTAA
TGTTATCATTCACCGAGATCTTAAACCGAGGAACGTTCTTCTGGTTAATTCGAGTGCAGACCACTTGAAAGTTGGAGACTTTGGGC
TTAGTAAGCTCATAAAGGTTCAAAACTCTCATGATGTCTACAAAATGACTGGAGAAACCGGGAGCTACCGGTATATGGCTCCTGAA
GTATTCAAGCATAGAAAATACGACAAGAAAGTGGACGTCTTCTCCTTTGCAATGATACTTTACGAGATGCTAGAAGGAGAGCCACC
ATTTGCGAACTACGAGCCGTATGAAGCGGCCAAACATGTATCAGATGGACACAGACCTACTTTCCGTTCCAAAGGATGCACACCTG
ATTTAAGAGAGTTAATAGTGAAATGCTGGGACGCAGACATGAACCAGAGACCATCGTTTCTGGACATTCTCAAGAGACTTGACAAG
ATCAAGGAAACTCTGCCATCAGATCATCATTGGGGCTTATTCACTTCATAATACACAAAAAAATCCTCTTCCTGAAAACAAGAAAG
TGACATTCTGTTTGCTTATTATTATTATTATTCTATGTTAAAACATTGTTTATTCTCATTTGTTTCACAGTAAACGACTTAAAAAA
AGTTGCGACATAAAAAAAGAAAGAAAAAAGAGACTTTTGTTGTTCCATGGATTGGATTGAGCATGCAAGTCAAATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002890035 kinase family protein [Arabidopsis lyrata subsp. lyrata] | 1374 | 2e-149 |
| AAF79405 F16A14.22 [Arabidopsis thaliana] | 1373 | 3e-149 |
| AAL77660 At1g14000/F7A19_9 [Arabidopsis thaliana] | 1373 | 3e-149 |
| NP_172853 VH1-interacting kinase [Arabidopsis thaliana] | 1373 | 3e-149 |
| ABK06431 flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] | 1373 | 3e-149 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54TM7 Probable serine/threonine-protein kinase drkD | 391 | 9e-037 |
| Q7T6X2 Putative serine/threonine-protein kinase/receptor R826 | 325 | 4e-029 |
| Q15569 Dual specificity testis-specific protein kinase 1 | 302 | 2e-026 |
| Q63572 Dual specificity testis-specific protein kinase 1 | 300 | 3e-026 |
| P54739 Serine/threonine-protein kinase pkaA | 298 | 6e-026 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14000.1 VIK (VH1-INTERACTING KINASE); ATP binding / protein kinase/ protein serine/threonine/tyrosine kinase | 1374 | 8e-152 |
| AT4G18950.1 ankyrin protein kinase, putative | 586 | 2e-060 |
| AT3G58760.1 ankyrin protein kinase, putative | 585 | 3e-060 |
| AT2G31800.1 ankyrin protein kinase, putative | 548 | 5e-056 |
| AT2G43850.1 ankyrin protein kinase, putative (APK1) | 526 | 2e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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