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Information for unigene UN16025

FASTA Sequence
Unigene ID: UN16025Length: 712  SNP
GCGAAAATTAGTGGATAATATCAAACATAAAGCCAGAAGTCGCTGAGAATTAAAGAAAAAAAAGAAGCAGAAAAGTGGGGAAAAAA
AAATCTTATCAAAACCAAAATGAGAGGAATTCCATCCAGTAATGTTTTCAAATGCAAAATATTTCAATACATATAACTAAACTCAA
AACACACAAAAACTCTGGAGCAATTGTGATGAGGATCTTGATTTAGATGGCTTCTGCTGCGATCCTTCCAGCGACTTGGTCAAGAT
CTCTCTGACCACTTGATGTTATCTTCCTTCCCCCCTTGGTGTCAAGGTCGACAATGTTCATGGTCTGAAGCTGCTGAAGAATGTGA
CGAGCAACACCACCACTGCTCTTGCAGAAATGAGGTGGACGGCTTCCGTTCCTCTTGCTTCCTCCGTAGATCCTGCGGAAAGCACC
GACTCCAAGTCCACCTCTCAGGTACACTTTCCTCGCCATGGATGCAGCTCTGATGTAGTACCAGTCAGGGTCATATGGAGCAAGCT
CCTTAAGTTTACCAGTCTTCACTATGTCTGTCCACGCTGGCAACTCAATCTTGCCGGAGCGCTTGAGATGGGCAGCGTAAGCCTTG
ACGAACTCGTGTGGAGAGACATCCTTCACCGTCTTGCCTGTCATTGTTGCTTCTTCTCCTCCTTCTCCTCCTTGTGATTCGGCGTC
GGCGCTTGTGCTTTTGGATTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200925 40S ribosomal protein S19-3 [Arabidopsis thaliana]7223e-074
NP_186857 40S ribosomal protein S19-1 [Arabidopsis thaliana]7071e-072
XP_002884301 40S ribosomal protein S19 [Arabidopsis lyrata subsp. lyrata]7071e-072
NP_197056 40S ribosomal protein S19-2 [Arabidopsis thaliana]7025e-072
XP_002284393 PREDICTED: hypothetical protein [Vitis vinifera]6651e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q9FNP8 40S ribosomal protein S19-37221e-075
Q9SGA6 40S ribosomal protein S19-17077e-074
Q9LF30 40S ribosomal protein S19-27022e-073
P40978 40S ribosomal protein S195803e-059
Q94613 40S ribosomal protein S194551e-044

TrEMBL top hits (Blast detail)Scoree value
Q67ZX8 40S ribosomal protein S19-like7222e-074
Q0WSH0 40S ribosomal protein S19-like7024e-072
A5C4J2 Putative uncharacterized protein6657e-068
A9PGL4 Predicted protein6657e-068
B9H0J0 Predicted protein6657e-068

Arabidopsis top hits (Blast detail)Scoree value
AT5G61170.1 40S ribosomal protein S19 (RPS19C)7221e-076
AT3G02080.1 40S ribosomal protein S19 (RPS19A)7076e-075
AT5G15520.1 40S ribosomal protein S19 (RPS19B)7022e-074

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  13%
 
129  30%
 
82  7%
 
63  10%
 
117  23%
 
102  7%
 
73  10%

Unigene MembersMember information