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Information for unigene UN16033

FASTA Sequence
Unigene ID: UN16033Length: 1745  SNP
ACATAAGTGAGAGTCACATTTTATAATGCAACGTCAAGATTATATAGATGTGAACTGAGACTGACGACAGAAATAAAACATGCGAC
ACAAACATATAATAACCGCAGGAATGTCACCATTATCATAAAACAAAATATCCAAAACAGGATCATAATCCGAAAGCACAAGAGTA
AAAAAACAGGAAACTTGAGTGATCAGTAGCTCCGCCACCTCCGATCAAGAACCCAATTAGGACAAGAGAGTTCTGACGGAGACGAA
CGGAAGCTGTAACACAAACAAGCTACATAAAACCAAACTAGAGTAAGAAAACTAAAATAGTACTTTGATTCATCTGCGGATGATAG
AGACTTGATGATTGGACTTTACTTGGCACCCTTCTTGACGGCAGCCTTGGTCACCTTGGCTCCAGTTGGGTCCTTCTTGTCAACGC
TCTTGATGACACCGACTGCAACAGTCTGCCTCATGTCCCTCACAGCGAAACGTCCAAGGGGTGGGTACTCAGAGAAGGTCTCAACA
ACCATGGGCTTGGTCGGAGTCATCTTCACCATACCAGCATCACCATTCTTCAAAAACTTGGGCTCCTTCTCGATCTCCTTACCAGA
ACGCCTGTCGATCTTGGTGAGGATCTCAGAGAACTTCACGGCAATGTGGGAGGTGTGGCAATCAAGAACCGGAGCGTAACCGTTAC
CGATCTGACCAGGGTGGTTCATGATGATAACCTGGGAGGTGAAGTTAGCAGCACCCTTGGCAGGGTCATCCTTGGAGTTGGATGCA
ACATACCCACGCTTGAGATCCTTGACGGCAACATTCTTAACGTTGAATCCCACATTGTCACCTGGAAGCGCCTCCACAAGAGACTC
GTGGTGCATCTCAACAGACTTAACCTCAGTGGTCAACCCTGAAGGAGCAAAGGTGACAACCATACCAGGCTTGAGCAAACCGGTCT
CCACACGTCCCACTGGCACCGTTCCAATACCACCGATCTTGTAGACATCCTGAAGTGGGAGACGGAGGGGCTTGTCTGAGGGCCTC
TTTGGCTCGTTGATCTGGTCAAGAGCCTCAAGGAGGGTTGGTCCCTTGTACCAGTCGAGGTTGGTGGACCTCTCGATCATGTTGTC
ACCCTCGAATCCAGAGATGGGGACGAATGGGATTTTGTCAGGGTTGTATCCAACCTTCTTCAAGTAGGAAGACACCTCTTTGATGA
TCTCATCGTACCTAGCCTTGGAGTACTTGGGGGTTGTAGCATCCATCTTGTTACAGCAGCAAATCATCTGCTTAACACCAAGTGTG
AAGGCAAGGAGAGCATGCTCACGGGTCTGGCCATCCTTGGAGATACCAGCTTCGAAACCACCAGTGGTGGAGTCAATGATCAAAAC
AGCACAATCAGCCTGGGAGGTACCAGTAATCATGTTCTTGATGAAATCACGATGACCAGGAGCATCAATGACAGTGCAGTAGTACT
TGGTGGTCTCGAACTTCCAGAGAGCAATGTCGATGGTGATACCACGCTCACGCTCGGCCTTAAGTTTGTCCAACACCCACGCGTAC
TTGAAAGACCTCTTGTTCATCTCAGCAGCCTCCTTCTCGAACCTCTCGATGACACGCTTGTCGATACCACCAAGCTTGTAGATCAA
GTGACCAGTGGTGGTTGACTTTCCAGAGTCGACGTGGCCGATGACCACAATGTTGATGTGAAACTTCTCTTTACCCATGGCTGTAA
AATCTCAGAGATATAGCGGCTAGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACS68201 elongation factor 1 alpha [Brassica napus]23359e-261
ACS68200 elongation factor 1 alpha [Brassica napus]23304e-260
NP_200847 Elongation factor 1-alpha [Arabidopsis thaliana]23278e-260
AAF79822 T6D22.2 [Arabidopsis thaliana]23278e-260
XP_002892424 T6D22.2 [Arabidopsis lyrata subsp. lyrata]23278e-260

Swiss-Prot top hits (Blast detail)Scoree value
P13905 Elongation factor 1-alpha23273e-261
P43643 Elongation factor 1-alpha22647e-254
P17786 Elongation factor 1-alpha22639e-254
O64937 Elongation factor 1-alpha22574e-253
O49169 Elongation factor 1-alpha22485e-252

TrEMBL top hits (Blast detail)Scoree value
Q0WSD5 Elongation factor 1-alpha23275e-260
Q9LN13 Elongation factor 1-alpha23275e-260
Q39093 Elongation factor 1-alpha23241e-259
Q9ASU9 Elongation factor 1-alpha23241e-259
Q9C5L4 Elongation factor 1-alpha23232e-259

Arabidopsis top hits (Blast detail)Scoree value
AT1G07920.1 elongation factor 1-alpha / EF-1-alpha23282e-262
AT1G07930.1 elongation factor 1-alpha / EF-1-alpha23282e-262
AT1G07940.1 elongation factor 1-alpha / EF-1-alpha23282e-262
AT1G07940.2 elongation factor 1-alpha / EF-1-alpha23282e-262
AT5G60390.1 elongation factor 1-alpha / EF-1-alpha23282e-262

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  5%
 
93  14%
 
83  14%
 
183  14%
 
191  5%
 
215  24%
 
203  14%
 
12  10%

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