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Information for unigene UN16062

FASTA Sequence
Unigene ID: UN16062Length: 1001 SSRSNP
GAGTCAACCAAATCCGAGACGATTCTTGAATGAAAATGGGAAATAAGAGGTTCTCTTACATAAACAAGACTTTAAATGTCACATAA
AACATCCAATCTAACGGACAAAAGTGAAAGAAAGTCTTTGTTTCAAAATCCGAACTAGAACAAGGCGGATAAACACATCACTCGTA
TTGAGAGTATCATCATCCTCAAAGACGACTAATGACTGCTTCAACTTCTTCTGGAGTGTAGAGATGGTAAGCTGGAGCTACCTTGG
CAATGTCCACATTATTCGGAGTCACCTTTTCTTCCATAACTTGCTTGAGGATAGACACCGCGATCGTCTCAGCTTCACTGAGTGAC
AGATCTTTGTTGAATTGCTCTTGAAGAGAACTATCAGCTCCTTCTGAGCCTGAGCCAATGGCCTTTGCGTTGCACTGCCAGAATGT
TCCTGATGGGTCCGTGTAGTACAAGCTTGGTCCGTTTTCATCATGACCAGCAATGAGAAGAGATACTCCAAATGGGCGAGACATTG
ATTCTTCATCTCCTTCACCAAACCGTAAAGCCAGATCACACAGCGCTTGCGTTGTGGACTCTACAGTCATTGGCTCACCATACGAG
AATCTGTGGTTTTGAGTTTCAACTCTTGCATGCTCAACAAGTGTACGTGCATCAGCAATTAAACCGCTCATGGCACAACCAATATG
GTCATCAATCTCCATAATCTTCTCCACACTGCTCGGCTCCAGCAAAGGAGAGGTGATACGCTTCTCGACAGCAAGCACAACTCCTT
CCTTTGTCTTGACTCCAATTGCAGTAGAACCAAGCTTGATAGCTTCAATGGCATACTCAACTTGGAACAACCTGCCTTCAGGAGAG
AAAGTGTTGACTCCTCTGTCATACTCGGTCCTAGTGAGAAACATCTTCTTCTTCTTCTTCTTCCGCGACTTCGATCTGATAAACCC
CTTAAATGTCAGTTGATTGATCGGCGAACTGGAAGAAACTGGGATGGATGGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882875 hypothetical protein ARALYDRAFT_478846 [Arabidopsis lyrata subsp. lyrata]11903e-128
NP_175788 proteasome subunit alpha type-5-A [Arabidopsis thaliana]11884e-128
NP_188046 proteasome subunit alpha type-5-B [Arabidopsis thaliana]11867e-128
CBI35797 unnamed protein product [Vitis vinifera]11778e-127
ACJ84130 unknown [Medicago truncatula]11742e-126

Swiss-Prot top hits (Blast detail)Scoree value
O81149 Proteasome subunit alpha type-5-A11882e-129
Q42134 Proteasome subunit alpha type-5-B11863e-129
Q9M4T8 Proteasome subunit alpha type-511721e-127
Q9LSU1 Proteasome subunit alpha type-511542e-125
Q9UT97 Probable proteasome subunit alpha type-58352e-088

TrEMBL top hits (Blast detail)Scoree value
B7FHA1 Proteasome subunit alpha type11741e-126
A5BYS9 Proteasome subunit alpha type11713e-126
C6SW82 Proteasome subunit alpha type11713e-126
C6TGU2 Proteasome subunit alpha type11695e-126
C6TMT4 Proteasome subunit alpha type11623e-125

Arabidopsis top hits (Blast detail)Scoree value
AT1G53850.1 PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase11891e-130
AT1G53850.2 PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase11891e-130
AT3G14290.1 PAE2; endopeptidase/ peptidase/ threonine-type endopeptidase11872e-130
AT3G22110.1 PAC1; endopeptidase/ peptidase/ threonine-type endopeptidase4417e-044
AT1G79210.1 20S proteasome alpha subunit B, putative4022e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
115  25%
 
126  30%
 
62  10%
 
101  5%
 
95  25%
 
81  5%

Unigene MembersMember information