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Information for unigene UN16069
| FASTA Sequence |
| Unigene ID: UN16069 | Length: 1409 |
SSR | SNP | ATATATAAACATCTGTAACCATGTCATATTATATAAAAAGAAGCTCATCATTCTTATTCCCAGCTACACCATCCACAATATTATTC
ATCAAGGTTCCTCAAACAAAGGTTAACAACAACACAAAGTCAATGGCACACCAGTAAACACGTGAGAGAGAGAGAGAGAGCAAAGA
TAACAAACAGGGGTTTAAAAGCCAAGCAAATGAAGCATTATAGCATTTTGAGCATGCATACGATTCTCAGCCTGTGGGAAGACAAT
GGAATAAGGAGCTTCCACGACTCCATTGGTCACCTCAACTCCTCTTTCTGCAGGCAAACAATGCATGAAATAGGCTTTTGGTCCAG
CCAACTTCATAAGAGCTTCATCCACCTGGAATCCTAGGAATGCTTTTCGGCGGTATTCAGCTTCATCCTTTTGGCCCATACTGGCC
CATACGTCTGAGTACACAACATCAGCTCCTATCACAGCTTCTTTAGCATCATGCACGATCTCTATCTTACTTAAACCAGCTTGTTC
TGCCTTTAGAACTCTCTCTTTGTCTGGCTCAAACCCTTTTGGGCAAGCGCAGACGAAGTGGAAAGGAATAACTGATGCCAATTCTA
ACCATGAGTGAACCATATTGTTCCCATCTCCAACATAAACAACCTTTGTCCCTTCGACTTGACCAATGTGCTCAATGATTGTGAGG
GCATCAGCCATAATCTGACAAGGATGGTTATGATCTGTCAGACCATTGACAACTGGTACACTCGAGTAGTTAGCCAAATCAAGAAT
GTCCTGATGAGCAAAGACACGGGCCATAATGATGTCATTATATCTCGACAGAACACGAGCAACGTCGCGAGTCTCCTCCCTCTTGC
CCATCTGGATGTCATCGGGACCAAGATACAAGGCATGTCCACCGAGCAAGAAGAAGCCAGTCTCGAAGGAAACACGAGTCCTCATG
GAGGGCTTTGCGAAGATCATAGACATAGACTTGCCTTTGAAAGGCAGATAGTTCCTCTCACCTGATTTCAACAGGGCCTTGACCTC
TGAGGCCTTGTCGAGAATCTTTTTGATGGTCTCTGTGTCAAAATCATCTATGGCCAGAAAGTCTTTCAGGTCACAACTTCCTTTCA
AATCGGAAGTTGTGGGGGAAGTGACGGAGGAGGCTTGGCAGGAGACACGAAGGCGGAGGGAGGAGAAGGTCGCCGGAGAAGAGAGT
GATACGGCGGAGAAGCGAGTGAGAGTGGTGGACGGTGAAGAGGAGAGGGAAAGAGCAGGTGATCGTGGCGTCGAGACGTGAGAAGC
CATAGCCGCCATTGTCCTAGTTAGGTTGATGATGATGAGTGATGACTCTTGTTAAGTGACGACACTCTGCTATACCTTTCTAGCTG
CAGAGGAGATTCGCTGGTCATTTTTGTTATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889019 hypothetical protein ARALYDRAFT_476678 [Arabidopsis lyrata subsp. lyrata] | 1718 | 2e-189 |
| NP_177667 ornithine carbamoyltransferase [Arabidopsis thaliana] | 1700 | 3e-187 |
| CAA04115 Ornithine carbamoyltransferase [Arabidopsis thaliana] | 1662 | 8e-183 |
| BAH57202 AT1G75330 [Arabidopsis thaliana] | 1598 | 2e-175 |
| XP_002281919 PREDICTED: hypothetical protein [Vitis vinifera] | 1453 | 1e-158 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O50039 Ornithine carbamoyltransferase, chloroplastic | 1700 | 1e-188 |
| Q43814 Ornithine carbamoyltransferase, chloroplastic | 1359 | 4e-149 |
| Q5JI16 Ornithine carbamoyltransferase | 780 | 6e-082 |
| O93656 Ornithine carbamoyltransferase | 768 | 2e-080 |
| O58457 Ornithine carbamoyltransferase | 767 | 2e-080 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z3C3 AT1G75330 protein | 1598 | 1e-175 |
| B9R7X3 Ornithine carbamoyltransferase, putative | 1445 | 8e-158 |
| A9P9Z5 Putative uncharacterized protein | 1415 | 2e-154 |
| B9H4D4 Predicted protein | 1414 | 3e-154 |
| B9V280 Plastid ornithine carbamoyltransferase | 1314 | 1e-142 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G75330.1 OTC (ORNITHINE CARBAMOYLTRANSFERASE); amino acid binding / carboxyl- or carbamoyltransferase/ ornithine carbamoyltransferase | 1701 | 9e-190 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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