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Information for unigene UN16182

FASTA Sequence
Unigene ID: UN16182Length: 821  SNP
CACAAAGCAAACGGACACACAAATCTCATCGGGAGAAGAAGACTCAGGCATTTTCATAGCTAAAACGCTTCTTTCCCAAAGGGGTA
TCCTGAGAACACAAAGGATAACAAACTATGGCCAAGGGAGTTGCAGTCTTGAACAGCAGCGAGGGTGTTAAGGGGACTATCTTCTT
CACCCAGGATGGAAACGGTGCGACCACTGTGACTGGTACAGTTTCTGGACTTAAACCTGGTCTACATGGTTTTCATGTCCATGCTC
TTGGTGACACCACTAACGGCTGCATGTCCACCGGTCCACATTTCAACCCTGAAGGTAAACAACACGGTGCCCCTGAGGATGCTAAT
CGACATGCTGGCGATCTAGGAAACATCACTGTTGGAGATGATGGAACTGCCACCTTCACAATCACTGACAGCCAGATTCCTCTTGA
TGGACCAAACTCTATTGTGGGAAGGGCTGTTGTTGTCCACGCTGACCCTGATGACCTCGGAAAGGGAGGCCATGAACTCAGCTTGG
CTACCGGAAATGCAGGCGGCCGTGTTGCTTGTGGTATTATTGGTCTTCAGGGCTAAGCTGTCACTTTATCGAGGAAGAGAGTGATG
TAATAAGGAGGTCATATACCTCCAGACCTGGCTAGTTTGTGTGTGCGTGTGTGTGGCTCCTTTGTGGATCAAATGCATTTTATTTA
AGACCCAAAAAAACAGAGAAAATTCCAGACTATTTTATGAATAACAAGAGCAGATGTGAACTTAAAACTTTGTGTGTATGAACTCG
GGTCTCCTGAAACTACACAATATAATGCTGAATTGTTGATGTTGCAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAD05576 Cu/Zn superoxide dismutase [Raphanus sativus]7861e-081
Q42611 RecName: Full=Superoxide dismutase [Cu-Zn] 17798e-081
XP_002889716 hypothetical protein ARALYDRAFT_888118 [Arabidopsis lyrata subsp. lyrata]7781e-080
P09678 RecName: Full=Superoxide dismutase [Cu-Zn]7682e-079
NP_172360 Superoxide dismutase [Cu-Zn] [Arabidopsis thaliana]7663e-079

Swiss-Prot top hits (Blast detail)Scoree value
Q42611 Superoxide dismutase [Cu-Zn] 17794e-082
P09678 Superoxide dismutase [Cu-Zn]7687e-081
P24704 Superoxide dismutase [Cu-Zn]7661e-080
Q42612 Superoxide dismutase [Cu-Zn] 27436e-078
P93258 Superoxide dismutase [Cu-Zn] 17113e-074

TrEMBL top hits (Blast detail)Scoree value
O22374 Superoxide dismutase [Cu-Zn]7869e-082
A3FMJ0 Superoxide dismutase [Cu-Zn]7625e-079
A9Q115 Superoxide dismutase [Cu-Zn]7617e-079
O81352 Superoxide dismutase [Cu-Zn]7609e-079
Q0VH22 Superoxide dismutase [Cu-Zn]7563e-078

Arabidopsis top hits (Blast detail)Scoree value
AT1G08830.1 CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1); superoxide dismutase7678e-082
AT1G08830.2 CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1); superoxide dismutase7678e-082
AT2G28190.1 CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2); superoxide dismutase5349e-055
AT5G18100.1 CSD3 (copper/zinc superoxide dismutase 3); superoxide dismutase5195e-053
AT5G18100.2 CSD3 (copper/zinc superoxide dismutase 3); superoxide dismutase4237e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  8%
 
112  15%
 
63  23%
 
82  15%
 
93  23%
 
72  15%

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