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Information for unigene UN16194
| FASTA Sequence |
| Unigene ID: UN16194 | Length: 1382 |
SSR | SNP | GACTCTCCACATACAAAAAAGGCAAACTAGACCTTCGCCGGCTATTAGAATCGGAAGAGAGTTCAGAAAGAAAAAAAAAGATGGAA
GGACTTGTTTCCTTTCAGCCCTTCCCCTCATCCGTCATTCAACGGCGTCTCTCTACCGTTTACCTCACCACCAGATACCCCTCCTC
CTCCTCCTCCTCTTGTGCTCCTCCTCTTCGTGCTCAACAGTCTGGAATCACGGGAGGTTCCGAAAGTGTTTCTTCGGCATTGGAGG
GTAAAGCGAGTGAGCAAGAAGTGGGTATGTTGTATCAGGATGAAGTAGTTTCTAGCCAAGGTATTAGGATAAGGAGACGACCACCT
ACTGGTCCTCCATTGCATTACGTTGGACCTTTTGAGTTCCGGTTACAGAACGAGGGTAACACTCCTCGCAACATCTTGGAGGAGAT
CGTATGGCACAAGGACAAAGAAGTTACTCTGATGAAGGAGAAAAGGCCTCTCTATACCCTGAAGAAGGCTCTCGAAAATGTTCCTC
CTCCTAGAGACTTCATTGCTGCTCTTAGATCTGCTCATCAGAGAACCGGCCTCCCTGGTTTAATAGCTGAGGTCAAGAAAGCTTCT
CCAAGCAGAGGAATCCTCAGAGAGGATTTTGACCCTGTTGCAATCGCTCAAGCTTATGAGAAGGGTGGAGCTGCATGTCTTAGTGT
TTTGACTGATGAGAAATACTTCAAGGGAAGCTTTGAGAATCTGCAAGCTATAAGGGACGCTGGTGTGAAGTGCCCTTTACTTTGCA
AAGAGTTCATTGTAGAAGCATGGCAGATATACTATGGGAGAAGCAAAGGCGCAGACGCTGTTCTACTGATCGCTTCTGTGTTACCT
GACCTTGACATCAAATACATGCTTAAGATTTGCAAAATACTTGGAATGGCTACTCTTGTGGAGGTTCACGACGAAAGGGAGATGGA
TCGCGTTCTAGCAATTGAAGGAGTCGAGCTCATTGGCATCAATAACCGTAACCTTGAAACATTTGAGGTAGATATTGGCATCACAA
AGAGGCTCCTGGAAGGAGAGCGTGGTGAATTGATCCGTCAGAAAGACATCCTCGTGGTTGGAGAATCTGGGTTATTCACTCCAGAA
GACATTGCATTCGTACAAGAAGCCGGTGTCAAAGCAGTTCTAGTGGGTGAATCTCTTGTTAAACAAAGTGATCCTGGGCAGGGTAT
CAGCACACTTTTTGGAAGAGATGTCTCAGGTTGAGTTTTGTGTAGAGTAACTTTTTGTATAGAGAAAAAAAACTACATTGTTTCTC
CATTTAAGCTCTTCTTCTTCTTTCTTTCAATGCCGCTCAAATGTGGAGAGACTTGTGCCTATACAGAAATATCCAACTATTTTGCC
TTTGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199633 indole-3-glycerol phosphate synthase [Arabidopsis thaliana] | 1626 | 1e-178 |
| XP_002863880 hypothetical protein ARALYDRAFT_494873 [Arabidopsis lyrata subsp. lyrata] | 1595 | 4e-175 |
| NP_001190488 indole-3-glycerol phosphate synthase [Arabidopsis thaliana] | 1561 | 4e-171 |
| NP_001078734 indole-3-glycerol phosphate synthase [Arabidopsis thaliana] | 1502 | 3e-164 |
| XP_002265275 PREDICTED: hypothetical protein [Vitis vinifera] | 1402 | 1e-152 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49572 Indole-3-glycerol phosphate synthase, chloroplastic | 1230 | 4e-134 |
| B7K0H0 Indole-3-glycerol phosphate synthase | 832 | 6e-088 |
| B0JTM2 Indole-3-glycerol phosphate synthase | 827 | 2e-087 |
| Q55508 Indole-3-glycerol phosphate synthase | 822 | 8e-087 |
| B8HP79 Indole-3-glycerol phosphate synthase | 792 | 2e-083 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LUB2 AT5g48220/MIF21_11 | 1626 | 8e-179 |
| A8MS79 Uncharacterized protein At5g48220.2 | 1502 | 2e-164 |
| B9T1U0 Tryptophan biosynthesis protein, trpc, putative | 1398 | 2e-152 |
| B7FI09 Putative uncharacterized protein | 1356 | 2e-147 |
| B4G1Z5 Putative uncharacterized protein | 1289 | 9e-140 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G48220.1 indole-3-glycerol phosphate synthase, putative | 1630 | 1e-181 |
| AT5G48220.2 indole-3-glycerol phosphate synthase, putative | 1502 | 1e-166 |
| AT2G04400.1 indole-3-glycerol phosphate synthase (IGPS) | 1230 | 3e-135 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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