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Information for unigene UN16203

FASTA Sequence
Unigene ID: UN16203Length: 1219  SNP
GGAGAGAGAGATAGATAGAGAAAACGGTGTTACCGCTTTTAGGAGAGAGAAAGATATAGAGAGAAGAAGTTTGTTTCTTCATTTAG
AAAATTTAGATACAGAGAAGAGAAGAGAGAGTTTGTGATGATGAGTCTGAGAAGAGGAGGAGAAAGACAAGACTTTCCGGCAGCGT
ACAACGTTGTCCATAAGCTGCCTCACGGTGACAGTCCTTATGTCCGAGCAAAACATGTTCAGCTGGTGGAGAAGGATGCAGAAGCA
GCGATAGAGCTGTTCTGGATAGCGATCAAAGCGAGGGACAGAGTGGACAGCGCTCTTAAGGACATGGCTTTGCTTATGAAACAACA
GAACAGAGCAGAAGAAGCCATTGATGCGATTCATTCCTTTAGGTATCTTTGTTCGAGACAAGCTCAAGAATCACTCGACAATGTCC
TCATCGATCTCTACAAGAAGTGTGGGAGGATAGAAGAGCAAGTCGAGCTATTGAAGCAGAAGCTTTGGATGATATACCAAGGGGAA
GCGTTCAACGGGAAGCCGACGAAGACGGCGAGGTCTCACGGGAAGAAGTTTCAGGTCACGGTCGAGAAGGAGACGTCTAGGATCTT
GGGGAACTTGGGATGGGCTTATATGCAGCTAAAGGACTACACAGCGGCTGAAACCGTGTACCGTAAAGCTCAAGTTGTAGAGCCTG
ATGCAAACAAGGCTTGTAATCTGTGCACTTGTCTCATCAAGCAAGGGAAGGTCGACGAGGCGAGGACGATTCTGTATCGCGATGTG
TTGCAAGAGAAGAGAGAAGGGTTTGATGATGATTCGAGGTTGAAGGTTCGAGTTCAAGAGCTTCTGAGCGAGCTAGAGCCTGTTGT
CGCTGCTTCTGTGTCTGTGGAATGTGAAGTCGGTATGGATGAGATCGCGGTTGTTGAAGGGATTGACGAGTTTATGAAAGAATGGA
GGAGGCCTTTGAGGACGAGAAGGCTTCCGATTTTCGAAGAGATCTTACCACTGAGAGATCAACTGGCTTGTTGATGATACTCTGTT
TGCTTTGGTCTTTGGATACTGAATAGGGAACTTTCTTGTGTTAAAAGAATGTTAGGTGAATGTAAGTTTACTTCTTGTAAGCTGTT
TTGGTATCATGGTTAGCTTGTTACTACTGTTCAATGAGTGACTCTCGTTCCAAATACTCTGTACTACTTTCATCGAATAGAAAAAA
TGGTATGTAGAGGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF40459 Strong similarity to the beta-9 tubulin gene (178 gene product) gb|AF060248 [Arabidopsis thaliana]13642e-148
NP_171969 male sterility MS5 family protein [Arabidopsis thaliana]13436e-146
BAE99325 hypothetical protein [Arabidopsis thaliana]13436e-146
XP_002892240 male sterility MS5 family protein [Arabidopsis lyrata subsp. lyrata]13168e-143
XP_002518126 conserved hypothetical protein [Ricinus communis]9342e-098

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9MAS6 F13M7.24 protein13642e-148
Q0WU73 Putative uncharacterized protein At1g0477013434e-146
Q8L730 At1g0477013434e-146
B9RWK7 Putative uncharacterized protein9341e-098
Q65X56 Os05g0506000 protein9115e-096

Arabidopsis top hits (Blast detail)Scoree value
AT1G04770.1 male sterility MS5 family protein13442e-148
AT5G48850.1 ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1); binding8272e-088
AT3G51280.1 male sterility MS5, putative7052e-074
AT5G44330.1 male sterility MS5 family protein5287e-054
AT4G20900.1 MS5 (MALE-STERILE 5)5125e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  7%
 
104  27%
 
111  7%
 
63  20%
 
94  27%
 
122  13%

Unigene MembersMember information