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Information for unigene UN16208
| FASTA Sequence |
| Unigene ID: UN16208 | Length: 1258 |
| SNP | GCATGTCGAAAGAGGAACCTTTAGTCATCGTCATTCTGTCCTTCATGACCAGGAAACTGGAGAAGAGTATTGTCCCTTAGATCATC
TCGTCATGAATCAGGATCCTGAGATGTTCACTGTCAGCAACAGTTCTCTTTCAGAATTTGGAGTTCTTGGGTTTGAGTTGGGTTAC
TCAATGGAAAGTCCAAACTCGTTGGTGCTATGGGAAGCTCAGTTTGGAGACTTTGCTAATGGAGCTCAGGTGATATTTGATCAGTT
CATCAGCAGTGGAGAAGCCAAGTGGCTGCGTCAAACCGGGCTTGTTGTGCTACTTCCCCATGGATATGATGGTCAGGGCCCTGAAC
ATTCAAGTGCTAGGCTGGAACGTTACCTTCAGATGAGTGATGACAACCCCTATGTCATACCAGACATGGAACCTACATTGAGAAAG
CAAATCCAAGAATGCAATTGGCAGATTGTTAATGCCACCACTCCTGCCAACTATTTCCATGTTCTGCGTCGTCAGCTACACAGAGA
CTTCCGTAAGCCTCTGATTGTAATGGCACCAAAGAACTTGCTCCGTCACAAGGACTGCAAATCAAACCTCTCTGAGTTTGATGATG
TCCAAGGACACCCTGGTTTTGACAAGCAAGGGACTAGGTTCAAGCGATTGATCAAGGATCAGAATGATCACTCTGATCTTGAAGAA
GGCATCAGAAGATTGGTACTTTGCTCCGGAAAGGTTTATTACGAGCTTGATGACGAGAGGAAGAAGGTTGGAGCAAGCGATGTGGC
TATTTGTAGAGTGGAACAGCTTTGTCCTTTCCCATATGATCTCATTCAGCGTGAGCTCAAGAGATATCCAAATGCGGAGATAGTTT
GGTGCCAAGAAGAGGCGATGAACATGGGAGCATTCAGCTACATAACTCCAAGGCTATGGACAGCAATGAGAAGCTTAGGCAGAGGA
GATATGGAAGACATTAAGTACGTTGGTCGTGGACCTTCTGCTGCTACTGCCACTGGTTTCTACACTTTCCATGTCAAAGAGCAAGC
CGAGCTCGTCCAGAAAGCCATTGGAAAGGAACCCATCAGTTAAAACCAAACTTCATTTTTTTGAATGAATTCTTTAAATAAGAAAC
TTTGGGTGAATCAAAGTGATAAACAACACTGACAAAATCATGTATTTGCTTTATTTGGCCCCTTTGATTTTTTTGAGCCTGTCTTG
TGTTGCAGGTTAATACGGATCATTCTCATTTTCATAAAAGCTTTGTTTTTTTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876300 hypothetical protein ARALYDRAFT_485968 [Arabidopsis lyrata subsp. lyrata] | 1878 | 6e-208 |
| NP_191101 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] | 1868 | 9e-207 |
| AAO42889 At3g55410 [Arabidopsis thaliana] | 1868 | 9e-207 |
| BAF01713 2-oxoglutarate dehydrogenase, E1 subunit - like protein [Arabidopsis thaliana] | 1868 | 9e-207 |
| XP_002528465 2-oxoglutarate dehydrogenase, putative [Ricinus communis] | 1742 | 4e-192 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q60HE2 2-oxoglutarate dehydrogenase, mitochondrial | 924 | 1e-098 |
| Q02218 2-oxoglutarate dehydrogenase, mitochondrial | 923 | 1e-098 |
| Q5RCB8 2-oxoglutarate dehydrogenase, mitochondrial | 918 | 5e-098 |
| Q148N0 2-oxoglutarate dehydrogenase, mitochondrial | 915 | 1e-097 |
| Q5XI78 2-oxoglutarate dehydrogenase, mitochondrial | 910 | 4e-097 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WME3 2-oxoglutarate dehydrogenase, E1 subunit-like protein (Fragment) | 1868 | 6e-207 |
| Q84VW8 2-oxoglutarate dehydrogenase, E1 subunit-like protein | 1868 | 6e-207 |
| B9SR46 2-oxoglutarate dehydrogenase, putative | 1742 | 2e-192 |
| B9HM58 Predicted protein | 1724 | 3e-190 |
| B9HTM3 Predicted protein | 1708 | 2e-188 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G55410.1 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative | 1869 | 2e-209 |
| AT5G65750.1 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putative | 1682 | 1e-187 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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