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Information for unigene UN16231

FASTA Sequence
Unigene ID: UN16231Length: 896  SNP
AATTTCTAGGGTTTTGCAACACAGAATCGCCGAACGAATCCAACGCCATCATGGGACGAAGACCTGCGAGATGTTACCGTCAGATC
AAGGGGAAGCCCTACCCGAAATCCCGCTACTGCCGCGGAGTCCCCGACCCCAAGATCCGAATCTACGACGTCGGGATGAAGAAGAA
AGGAGTCGACGAGTTCCCTTTCTGCGTCCACCTCGTCTCCTGGGAGAAAGAAAACGTCTCCAGCGAAGCCCTCGAGGCCGCGCGTA
TCGCCTGCAACAAGTACATGGTGAAATCCGCAGGGAAAGATGCCTTCCACTTGAGGATTAGGGTTCATCCTTTCCATGTGTTGCGT
ATCAACAAGATGCTTTCGTGCGCCGGAGCTGATAGGCTTCAGACTGGTATGAGAGGCGCCTTTGGTAAGGCGCTGGGGACTTGCGC
TAGGGTTGCGATTGGGCAGGTGCTTTTGTCTGTGAGGTGTAAGGATAACCATGGGGCTCATGCTCAGGAGGCGTTGAGGAGGGCTA
AGTTTAAGTTCCCTGGGCGTCAGAAGATTATTGTTAGCAGGAAATGGGGTTTCACTAAGTTCAACCGTGCTGATTACACTAGGCTG
AGACAGGTTAAGAGGATTGTTCCTGATGGTGTCAATGCTAAGTTTCTGTCGAACCATGGTCCTTTGGCTAACCGTCAACCTGGAAG
TGCGTTCATATCAGCAACCAGCGATTAAGAATGAAGATGATTTGTGGTTGTAGTACCGATAATACTCTAGTTTCCGAAGTTATTCG
TTTTGTTTTTGTTGTAACAGTTGAAAACAAGATCCTTGTCTGGTTTCGTTTTGTTTGGACAATTGTTTTATGGTCTGTTTCTGTGT
TCATTGCTTTAGTTCTGGTTTTACTTCTCATTTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564878 60S ribosomal protein L10-3 [Arabidopsis thaliana]11453e-123
NP_174013 60S ribosomal protein L10-2 [Arabidopsis thaliana]11176e-120
XP_002893373 60S ribosomal protein L10 [Arabidopsis lyrata subsp. lyrata]11132e-119
NP_563945 60S ribosomal protein L10-1 [Arabidopsis thaliana]11104e-119
CAA78856 Wilm's tumor suppressor homologue [Arabidopsis thaliana]11023e-118

Swiss-Prot top hits (Blast detail)Scoree value
Q93W22 60S ribosomal protein L10-311452e-124
Q08770 60S ribosomal protein L10-211173e-121
Q93VT9 60S ribosomal protein L10-111102e-120
P93847 60S ribosomal protein L1010294e-111
Q9SPB3 60S ribosomal protein L1010286e-111

TrEMBL top hits (Blast detail)Scoree value
Q2HIH6 At1g2691011174e-120
B9SED8 60S ribosomal protein L10, putative10342e-110
B7FGF8 Putative uncharacterized protein10323e-110
C6SVF4 Putative uncharacterized protein10323e-110
C6SVX5 Putative uncharacterized protein10261e-109

Arabidopsis top hits (Blast detail)Scoree value
AT1G66580.1 60S ribosomal protein L10 (RPL10C)11461e-125
AT1G26910.1 60S ribosomal protein L10 (RPL10B)11172e-122
AT1G14320.1 SAC52 (SUPPRESSOR OF ACAULIS 52); structural constituent of ribosome11102e-121
AT1G14320.2 SAC52 (SUPPRESSOR OF ACAULIS 52); structural constituent of ribosome4192e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  17%
 
64  14%
 
105  17%
 
75  17%
 
114  14%
 
93  10%
 
123  10%

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