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Information for unigene UN16234
| FASTA Sequence |
| Unigene ID: UN16234 | Length: 1233 |
| SNP | GACCCATTAAAGTTTTACAAATGCAATGACGAATATAGCCTCCGTCAGTTTATAGCCGGCGACGACGATCTCCGTCTTCCTTTGGC
TAGAGAGATAGAAAAAGCTATGGCGGACGAAGAAGACGAGTCACCGGAGACAGAGCTAAGTTACGATCAGAAGAAGGAAATCGCGA
AATGGTTCCTCCTCAACGCTCCCGCTGGCGAAATCAATTACGTCGCCAAAGATTTAAAGGCTGTTTTGAGCGATGAGGAAGTGTAC
AACGAGGCAGCCATGGAGGCGTTTCCAGTGTACAATAAGTCTCACATGATCTGCCTTGAAATGCCTAATAGGGCGGGTGATGTGAT
TGTTTCATCTTACAGTGAAATTACAGAGAATGAGTACCTTGATCCAAGAACTGCCCAGGTTGCCATTGTTGATCACGTCAAACAGA
TTTGTACAAATGTAAGACCTGCTGACGATGAAGAACTTCCATCTTCGTATATTGAGGAATTCAGATGTGCCCTTGATGCTGAAATC
CAGAGATACGTTAGTGAATCTTACCCGAAAGGTGTGTCCGCAGTTAACTGTGTGAAAGGCAAAGATGCTGATGGTCCAGGGTCGAA
CTTTGAGTTCGTCGTTATAATTACTGCCATGAAGCTCAGTCCCCAAAACTTCTGTAATGGAAGTTGGAGATCTGTATGGAACATTG
ATTTCCAGGATGAATCTCAGTGCTTGACATAAAAGGGAAATTGCAGGTAGGAGCCCATTATTTCGAAGAGGGGAATGTGGAGTTAG
ATGCAAAAAAAGAGTTCCAAGATTCGACAATATTTCAGTCTCCCGATGACTGCGCGATAGCTATAGCCAATATCATCCGACACCAT
GAGACGGAGTACCTTGCAGCTCTAGAGATGGCGTATTCCAAATTACCGGATAACACTTTCAAGGTTCTGAGGAGGAAACTTCCAGT
GACAAGAACTCTGTTCCCATGGCAGAACACTTTACAGTTCAGCCTAACCAGAGAGGTAGAGAAAGAACTTGGACTTGGCAAGTGAG
ACAAAATCATCAAATTTCAGCCTCCTCTGTTTCCATATATTTTTACCAAGTTTCTGTGATTCTGTTATGTAAGTGGAGAGGCTAAA
TATCATCCCTTACTGTTTCTGGTGGTGTGTCGTGTATTTGTTCCTTCCGCTGATGTAATGTACAAACCGCATGCAAGTATTGAATC
TTTGATATCTATAAAAGAAATTCCGTTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882421 alpha subunit of F-actin capping protein [Arabidopsis lyrata subsp. lyrata] | 988 | 9e-105 |
| CAA05054 alpha subunit of F-actin capping protein [Arabidopsis thaliana] | 967 | 2e-102 |
| NP_187203 F-actin-capping protein subunit alpha [Arabidopsis thaliana] | 965 | 4e-102 |
| NP_001154593 F-actin-capping protein subunit alpha [Arabidopsis thaliana] | 965 | 4e-102 |
| XP_002512432 f-actin capping protein alpha, putative [Ricinus communis] | 818 | 5e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82631 F-actin-capping protein subunit alpha | 965 | 2e-103 |
| A4FUA8 F-actin-capping protein subunit alpha-1 | 198 | 2e-014 |
| Q09YN4 F-actin-capping protein subunit alpha-2 | 193 | 6e-014 |
| P52907 F-actin-capping protein subunit alpha-1 | 191 | 1e-013 |
| Q5NVM0 F-actin-capping protein subunit alpha-1 | 191 | 1e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q541X2 Putative alpha subunit of F-actin capping protein | 965 | 3e-102 |
| B9RFB3 F-actin capping protein alpha, putative | 818 | 3e-085 |
| A5AD20 Putative uncharacterized protein | 816 | 6e-085 |
| B9I7I3 Predicted protein | 797 | 9e-083 |
| B9N4I7 Predicted protein | 781 | 6e-081 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G05520.1 F-actin capping protein alpha subunit family protein | 965 | 2e-104 |
| AT3G05520.2 F-actin capping protein alpha subunit family protein | 965 | 2e-104 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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