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Information for unigene UN16240

FASTA Sequence
Unigene ID: UN16240Length: 934 SSRSNP
GCACAACACTTCAGTTTTTAGCAAAGGAATATTAAGCATCCATAGTTTATGTTTCTTGCAAACATGAAAGGGGTCGTGCAAGTTGC
AACTAGAAAACAAACATCTCAAGCAGACAAAACTCGGAAGGAAATGAAATGTATCGTTTGGTAGGGAGACAAGTTTTAGAGCGTCT
CTAGATCTTGTTGAATGCGACAATGTCAACACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTTCAATGAGGTTGT
CTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGAGCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCC
CATAGAAGACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATCTGTCTCGTCATCCCATGGTTTCACTTCCAT
GAGCACAGATGACTTTCCACTCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTGTCCTCTGCAGCTTTCTTTTCCTCCT
CGGTCTCGTCACCAAACAGATCCATGTCATCATCATCATCAGCTGCAGCTACTGCGGGTGCCTCAGCTTGAGCAGGAGCAGTAGCA
GAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCAAGGTGGGAGGCGACACAGTCGTACCACTTGCTAGCATT
AGGGAAACTCTCGCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACAATTGATCTCCGGAGATGTAGGTTT
TTCCGACGAGGTGCTCCTCCACGGATTTGAGACCCTGCTCTGTGTGTAGATCTGAAAAGGTCACCGCCATTGTAGCTAGCTGCTGC
TTTAGTGAGTTAGGTGAAAGAGAGAGAGAGAGAGAGAGAGAGCAAGCTGCTTGAGAACGTACACTATAACCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata]10397e-111
NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana]9975e-106
NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana]9473e-100
AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana]8685e-091
XP_002266279 PREDICTED: hypothetical protein [Vitis vinifera]8641e-090

Swiss-Prot top hits (Blast detail)Scoree value
Q9SCX3 Elongation factor 1-beta 29972e-107
Q84WM9 Elongation factor 1-beta 19472e-101
P29545 Elongation factor 1-beta8046e-085
P29546 Elongation factor 1-beta7331e-076
P93447 Elongation factor 1-delta6872e-071

TrEMBL top hits (Blast detail)Scoree value
Q29PY2 At5g121109472e-100
A9P7W8 Predicted protein8568e-090
B9GEM9 Predicted protein8343e-087
B6SIK8 Elongation factor 1-beta7861e-081
B6SLK4 Elongation factor 1-beta7842e-081

Arabidopsis top hits (Blast detail)Scoree value
AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2)9982e-108
AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1)9481e-102
AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative5204e-053
AT1G30230.2 elongation factor 1-beta / EF-1-beta5152e-052
AT1G30230.1 elongation factor 1-beta / EF-1-beta5142e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  15%
 
127  54%
 
182  15%
 
201  8%
 
191  8%

Unigene MembersMember information