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Information for unigene UN16240
FASTA Sequence |
Unigene ID: UN16240 | Length: 934 |
SSR | SNP | GCACAACACTTCAGTTTTTAGCAAAGGAATATTAAGCATCCATAGTTTATGTTTCTTGCAAACATGAAAGGGGTCGTGCAAGTTGC
AACTAGAAAACAAACATCTCAAGCAGACAAAACTCGGAAGGAAATGAAATGTATCGTTTGGTAGGGAGACAAGTTTTAGAGCGTCT
CTAGATCTTGTTGAATGCGACAATGTCAACACTCTGGATGTACTCGTTGTTAGGTTCAGAGGTGAGATAGTCTTCAATGAGGTTGT
CTGGGGAGACGAGGTCATCAACGATTGTGAGCATGATCGTGAGCTTCTTGATCCCGTAACCAACTGGAACCAGTTTTGAAGCTCCC
CATAGAAGACCAGGCATCTCAACAGCACGAACACACTCCTCAAGTTTCTTCATATCTGTCTCGTCATCCCATGGTTTCACTTCCAT
GAGCACAGATGACTTTCCACTCTCTTTGGGCTTCTTGGTGTCCTTCTTAGCAGCCTCCCTGTCCTCTGCAGCTTTCTTTTCCTCCT
CGGTCTCGTCACCAAACAGATCCATGTCATCATCATCATCAGCTGCAGCTACTGCGGGTGCCTCAGCTTGAGCAGGAGCAGTAGCA
GAGCCACCGATTGAAACTCCTACGGCTTTACCAGGGAAACTTTTAGCAAGGTGGGAGGCGACACAGTCGTACCACTTGCTAGCATT
AGGGAAACTCTCGCTTGGTTTCTCAACAACGGCAGCGTATACCTTCACATCATCTACAGACAATTGATCTCCGGAGATGTAGGTTT
TTCCGACGAGGTGCTCCTCCACGGATTTGAGACCCTGCTCTGTGTGTAGATCTGAAAAGGTCACCGCCATTGTAGCTAGCTGCTGC
TTTAGTGAGTTAGGTGAAAGAGAGAGAGAGAGAGAGAGAGAGCAAGCTGCTTGAGAACGTACACTATAACCTCC
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GenBank top hits (Blast detail) | Score | e value |
XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata] | 1039 | 7e-111 |
NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana] | 997 | 5e-106 |
NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana] | 947 | 3e-100 |
AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana] | 868 | 5e-091 |
XP_002266279 PREDICTED: hypothetical protein [Vitis vinifera] | 864 | 1e-090 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9SCX3 Elongation factor 1-beta 2 | 997 | 2e-107 |
Q84WM9 Elongation factor 1-beta 1 | 947 | 2e-101 |
P29545 Elongation factor 1-beta | 804 | 6e-085 |
P29546 Elongation factor 1-beta | 733 | 1e-076 |
P93447 Elongation factor 1-delta | 687 | 2e-071 |
TrEMBL top hits (Blast detail) | Score | e value |
Q29PY2 At5g12110 | 947 | 2e-100 |
A9P7W8 Predicted protein | 856 | 8e-090 |
B9GEM9 Predicted protein | 834 | 3e-087 |
B6SIK8 Elongation factor 1-beta | 786 | 1e-081 |
B6SLK4 Elongation factor 1-beta | 784 | 2e-081 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 998 | 2e-108 |
AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 948 | 1e-102 |
AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 520 | 4e-053 |
AT1G30230.2 elongation factor 1-beta / EF-1-beta | 515 | 2e-052 |
AT1G30230.1 elongation factor 1-beta / EF-1-beta | 514 | 2e-052 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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