Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN16242

FASTA Sequence
Unigene ID: UN16242Length: 1024  SNP
CGGGTAGAATGTTGTATTATTCTTTGAAATTTGGAAACCGACAACTTGGGCATTTATTCACTTCAATTATTAGCGGGAGCCACTAA
CAGAAGCTATCAAAACAAGACAAAGAAACAAACCAAAGGAAAACCGATTTAAACCGATCTCACATCGAATGAACCCTGTTATCTAA
TTCTGGAAACTCCAGTCCCAGATCTCGTGACGCTCAACACCACGGCCCATTGAACCGGTAAAACCGGCGTACATCTTCTCGAGCAG
CACATTAGAGAGGTCGAATTTCTCCTCGATCAATGGCCGGTTCGGTTTCTTCAAATGCGCGAGACCGATGGTAACCGAGATTACTT
TTAAATTGTTGTTGTACTCGACCCAAGCCGTGTACTTATCTCCACTGCTCAGCTTCAAGTCCTTGAACAACCAACCGTTTCTTGTC
ATAACCCAATAACCGGATTTAACCGACTTCACCGAATCGACAGAATTAATGTCGATTCCGACATGGTTATCGTTGATGTCTTTAAA
AGACTTGTCCTGAAACACGTCGAACTCAACAGCAAACAGATGGTTACTGGGATGACCGTTGCTGGTTCGGTTCACGAGACTTAGGT
AGCCTAAACCGGAACCGGCATGTTGGTTACTTGGGACGACGAGGAAGGCGAGACCGTGACCAGGAGTAGGGTTTGTTCGGTGAGGA
GTGATGGAGAAAGTGAAAGAGGTCTTGAAAGGGTAAACAGAAGAAGCGTTGTTGGGAGGTTTGAAGGTGATTGGGTTGATGAAAAT
GGCTCGACCATGAGAGAAAGGAATTTTGTCTTTGGTCAAAGAGAGAGAACCGGACCGGGTCGTGCCGTCGGTGTCGTGACCATACT
CTGCGTCTCCATGGAACGAGAAGAGATCGGAGCCGTTACCGAAGTGGTTGAATTTCAATCTGTAAGCATAAGTGGTTTGAGGGGTG
AAGATAGCTATGAAGAGAGTGATGACGCAGAGTGTTTGCATTGTCATCTTTGTTCTCCCTTTTCTTTTGGGGAAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891726 legume lectin family protein [Arabidopsis lyrata subsp. lyrata]11634e-125
NP_175715 legume lectin-like protein [Arabidopsis thaliana]11519e-124
BAF01418 putative protein kinase [Arabidopsis thaliana]11501e-123
XP_002891727 hypothetical protein ARALYDRAFT_474427 [Arabidopsis lyrata subsp. lyrata]8759e-092
NP_175716 legume lectin-like protein [Arabidopsis thaliana]8515e-089

Swiss-Prot top hits (Blast detail)Scoree value
P42088 Lectin1641e-010
Q66GN2 Lectin-domain containing receptor kinase A4.31631e-010
P29257 2-acetamido-2-deoxy-D-galactose-binding seed lectin 21577e-010
Q9M020 Lectin-domain containing receptor kinase A4.21577e-010
P86352 Seed lectin alpha chain1488e-009

TrEMBL top hits (Blast detail)Scoree value
Q9LNN2 F8L10.7 protein11516e-124
Q0WN82 Putative uncharacterized protein At1g5307011508e-124
Q9LNN3 F8L10.6 protein8514e-089
Q9LNN1 F8L10.8 protein7932e-082
Q9LZF5 At5g033507573e-078

Arabidopsis top hits (Blast detail)Scoree value
AT1G53070.1 legume lectin family protein11523e-126
AT1G53080.1 legume lectin family protein8512e-091
AT1G53060.1 legume lectin family protein7931e-084
AT5G03350.1 legume lectin family protein7572e-080
AT3G16530.1 legume lectin family protein7142e-075

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1214  26%
 
812  22%
 
912  22%
 
105  9%
 
76  11%
 
114  7%
 
181  2%

Unigene MembersMember information