Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN16260

FASTA Sequence
Unigene ID: UN16260Length: 1096  SNP
GAGAAAAATGGAAAAAAAGAACATATAATAAAACAATATCATGGTTTAGCCAGAACATACTAACAAGTATCATAAGAGAGCTGTAC
AAGCAATAGGTCTCAAAACACCAAGATGTAAATCCATAAAACATAAAAGCAAACTCCAGCACTGCGTGTCATAAAGAACAATGAAC
CAATCTCTGTTCTAAAACACTCAAAAGCCTTCAAGGCTTATATCCATAGCCATAACTGTCATCTCTCTTGTTGTTCCTAAAAGCAC
AGCAACCAACAGAGTAGACAATGATAAGGAAGACAAGGAAGATGCTGTTGACTACTGCAACTTTCTTCCATGCGCTCTTGACGTTG
TCGAGAAGACCCGCCTTGCAAGATTGGCAATCGAAGCAGAGCTTGTTTGGTGCGTTGTCCCAGCTTTGGCAGTCTGGATTAGCATG
TGGTCCAGCCGTCTTGGTCCAGTTTGTGGCACTTATGTAAGTAAATTGGCATTGTTCTGAGGGTTTGCAGCAACCAGACTGAAGGG
CAGTAAGATGTTCGTTGTAGAAGTTGGTGACAGGAACATTAACAAGCTTAGCTTCAAGCTTAGAACAAACCTTGCTGTCAACGAGA
CAACTCCTAATCTTATTCCAGTTCTTGTCGCTGTCCACACGTTTCTGCAACCAGTTAGAGTAATCTCCAAGTCTATACTCTTTATA
CCCTCTCCCAGAAACCTTCTCGCCTGCGCCTTTGTTAGTAACGACAAAGGCGAAAACCGTAACTGAGAAGACGAGGAGAATCAAGA
GGAACATGACAAAGAGGTAAGTCCAGAGAAGCCATGTGACTCTGCAACAGGAACCAATCAAACCAGCGATTGCTACAACCATGAGG
AAAACTCCGAGAGCGATCACGGGTTTGTCCAGGAAACGCTCACACTCCGTTGAGCCGTTTTGGCTGAGCCAGATTCCTCCAGCTAA
GATGGGAATAGAGAGGAGGAAGACGATGAAGTTGAGTATACCAACGAGGTTGTTGCTACAACGAACCATGGTTTCAAGAAGTCGAA
ATTGGAGAGAAAGTTTGAGAATTTAGGGAAACCCTAGAAGCGAATTTGAGAGGATGTTTGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33633 unnamed protein product [Thellungiella halophila]13014e-141
XP_002880529 hypothetical protein ARALYDRAFT_481243 [Arabidopsis lyrata subsp. lyrata]12692e-137
NP_850045 tetraspanin8 [Arabidopsis thaliana]12656e-137
BAD42919 similar to senescence-associated protein [Arabidopsis thaliana]12648e-137
ACU20029 unknown [Glycine max]10452e-111

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8S8Q6 Putative uncharacterized protein At2g2381012654e-137
Q683G1 Similar to senescence-associated protein12645e-137
C6TDX7 Putative uncharacterized protein10451e-111
B9SQE3 Putative uncharacterized protein10414e-111
A5BRM6 Putative uncharacterized protein10172e-108

Arabidopsis top hits (Blast detail)Scoree value
AT2G23810.1 TET8 (TETRASPANIN8)12662e-139
AT4G28050.1 TET7 (TETRASPANIN7)10091e-109
AT4G30430.1 TET9 (TETRASPANIN9)10053e-109
AT3G45600.1 TET3 (TETRASPANIN3)6675e-070
AT5G60220.1 TET4 (TETRASPANIN4)6631e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
713  35%
 
67  19%
 
126  16%
 
112  5%
 
85  14%
 
104  11%

Unigene MembersMember information