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Information for unigene UN16336

FASTA Sequence
Unigene ID: UN16336Length: 1195  SNP
GGACTTTTCTCCCCACACATATAACCCAAGTCTATCTTTCTCTCTTTAGCTTTAACCCCCAAAGGAAAAGATAAGAGCTTTAAGTT
TCTTTACCTTCTCTACATGGACTTGTCTGTACTTGAAAGAGTTAATTGGCTGCAACAGCAGCAAATGGTCTCACCAGATTTTTTTG
AGATACTTGGCTCAGATGGGAGAGAAGAGCTCAAAAGGGTTGAGAGTTATTTGGGAAACAATAATGATGAGGTGCAGGGTTTCAGA
CATTATGAAACTATTGATGGTTGCATCTCAAGGACAAGTAGCTTCCAAATGGAACAAGTGAAGAACAATGAAGAAAACAGAGTCAT
TGCCTTGCAGCCCAAGAGAAAAACAGAGGGTAAGACAGAAAAGATAGAGAACAAAAAGAAGAAGAAGATCAAAACAGAGGATGAAA
CAGAGTCAAGCATGAAAGGAAAATCAAACATGAGCAACTCAGAGACATCCTCAGAGATTCAGAAGCGAGACTACATCCATGTGAGA
GCTAGGCGAGGTGAAGCCACCGACAGACATAGCTTAGCAGAAAGGGCAAGGAGAGAAAAGTTAAGCAAGAAGATGAAATGTCTTCA
AGACATTGTTCCTGGATGCAATAAAGTTACTGGTAAAGCCGGTATGCTTGATGAGATCATCAACTATGTCCAATCTCTGCAGCAAC
AAGTCGAGTTCTTGTCTATGAAACTCTCTGTCTTAAATCCAGAGCTTGAGTTTCATATCAATGAATTATCCACTAAACAGTTTCAG
TTGCTTCACAGATCTTTCAGAAGCTGTCCCAAAGCAGCCAATGATGGTGGATGCAAGTTCTTTTCCGTTACAGCAGCATGGTTCTC
TAGATTACTCTCTCATAAATTCAAACCAAACCACAATTCTTAGCTCTAAAGATCAGACATCATCGAGCTGGGAAATTCACTCACAA
TGTCTTTACAACAACTTGAGAACCGATTCAGTTTCAAGTTTCTTCAGCCTCAAGTAAAAAAAAACTCTGGATAGGGCTTACTGAAA
AATCTGTCTTATCCATGTTATCTTTAAATTTGAACCAGAAAGACAGAGGAAACCAATCCAAAGATCTTTCAACCTCTTGTGGTCAA
AAAAACTTATTGTTGTACATTTGTAGTATACATATCATATCTCCAAAATACAATCTCACTTGTTATTATTTGATTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869033 predicted protein [Arabidopsis lyrata subsp. lyrata]9564e-101
NP_195372 transcription factor BEE 2 [Arabidopsis thaliana]9484e-100
AAK96779 Unknown protein [Arabidopsis thaliana]9484e-100
BAJ33809 unnamed protein product [Thellungiella halophila]9431e-099
AAM10947 putative bHLH transcription factor [Arabidopsis thaliana]9403e-099

Swiss-Prot top hits (Blast detail)Scoree value
Q93VJ4 Transcription factor BEE 29482e-101
Q9ZPW3 Transcription factor bHLH645512e-055
Q9CAA9 Transcription factor bHLH493881e-036
Q8GY61 Transcription factor bHLH633881e-036
Q9SRT2 Transcription factor bHLH623801e-035

TrEMBL top hits (Blast detail)Scoree value
B9RH53 Putative uncharacterized protein4133e-038
C6TKT4 Putative uncharacterized protein4098e-038
B9MXN1 Predicted protein4052e-037
B9HRM4 Predicted protein4025e-037
C0JP13 Putative basic helix-loop-helix protein BHLH73945e-036

Arabidopsis top hits (Blast detail)Scoree value
AT4G36540.1 BEE2 (BR Enhanced Expression 2); DNA binding / transcription factor9481e-102
AT4G36540.2 BEE2 (BR Enhanced Expression 2); DNA binding / transcription factor9373e-101
AT2G18300.2 basic helix-loop-helix (bHLH) family protein5512e-056
AT2G18300.1 basic helix-loop-helix (bHLH) family protein5403e-055
AT1G68920.1 basic helix-loop-helix (bHLH) family protein3881e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  7%
 
912  44%
 
104  15%
 
114  15%
 
83  11%
 
72  7%

Unigene MembersMember information