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Information for unigene UN16500
| FASTA Sequence |
| Unigene ID: UN16500 | Length: 1898 |
SSR | SNP | GGAATTTTGACCAATAAACTGAGATTATTCTCCGTCTCTCTCACCTCTTTTCTCGGACTCATCATCCTCGGCTTCGACTCGATACT
CATTTTTCTCCGATTTAGGGATTCCATACTCGCCATGTATCGCACGGCAGCTTCACGAGCCAGGTCTCTCAAGGGATCTCTTAGCC
GAGGTTTGGGACCTGCGGCGCGTTATGCAAGCTCTAGTGCTGTTGCTACGACCTCTTCTTCTTCTTCTTCTTCTCCAGGTTTCTTA
GGCTGGTTGACTGGTGGATCCTCTGGCTCCCTTGCTTCACTGGACATGCCACTACAGGGCGTTTCTCTTCCTCCCCCGCTTCCTGA
CCGCGTCGAGCCAAGCAAACTCAAGATCACTACTCTTCCTAATGGCCTCAAAATCGCCTCAGAGATGTCTCCCAATCCGGCAGCTT
CTATTGGTTTGTATGTTGATTGTGGTTCGATCTATGAGGCTCCTTATTTCCATGGAGCAACGCATTTGCTTGAAAGGATGGCTTTC
AAGAGCACGACGAACAGAAGCCATCTACGTCTTGTCAGGGAGATAGAAGCGATTGGAGGGAACACCTCTGCATCTGCGTCTCGGGA
GCAGATGAGTTACACTATTGATGCTCTTAAAACCTATGTCCCTGAAATGGTTGAGGTTCTTATTGACAGTGTGAGGAACCCTGCTT
TCTTGGACTGGGAAGTCAATGAAGAGCTACGTAAAATGAAGGTGGAGATAGCGGAACTTGCGAAGAACCCTATGGGGTTTCTCATG
GAGGCTGTTCATTCTGCTGGTTATTCCGGTGCATTGGCTAATCCTCTGTACGCACCTGAGTCTGCTTTGCACAGATTGAATGGGGA
ACTCTTGGAAGAGTTTATGACTGAGAATTTCACTGCTGCACGTATGGTGTTGGCGGCAAGTGGAGTTGAGCATGAAGATCTTTTGA
AAGTTGTTGAGCCATTTAACTTCTGACCTTCCTAATGTCCCACGCCAAGCTGAGCCAAAATCTCAGTATACTGGTGGAGATTTTCG
GCAACATACTGGTGGAGAGGCTACACACTTTGCGCTTGCCTTTGAGGTTCCCGGCTGGAAGAACGAGAAAGAAGCACTCATCGCCT
CTGTTCTCCAGATGCTTATGGGAGGAGGTGGCTCCTTCTCAGCTGGAGGCCCTGGAAAAGGAATGCACTCATGGCTATATCTCCGT
ATTCTGAACGAATATCAGCAAGTTCAGTCATGCACCGCATTCACTAGCATCTTTGACAACACTGGACTGTTTGGAATCTATGGTTG
CTCGAGTCCTGAGTTTGCTGCAAAAGCAATTGAATTAGCAGCTAAAGAGCTGAAAGATGTAGCAGGAGGAAAAGTTAACCAGAAGC
ATCTAGATCGCGCCAAGGCAGCCACAAAATCTGCAGTTCTGATGAATTTGGAATCTCGGATGATTGCAGCAGAAGACATTGGCAGG
CAGATACTTACATACGGAGAGAGGAAACCAGTTGAGCAGTTCTTGAAGACAGTAGACGAACTTACGTTGAAAGACATTACAGATTT
CACCAGCAAGATTATTTCAAAGCCTTTGACAATGGGTTCCTTTGGAGATGTGTTGTCTGTTCCGAGTTACGACACCGTAAGCAGCA
AGTTTTGTTGAAGCAGGAAAATATTTGCTAGACAAATCAACAATGTTTTGAGACTTGTAAAATAAATCTTTTGGGGAGAAGAGAAG
AAGACCCAACCAAATTTTATTATTTTTATTTAAATGGAATTTTGTATTCCAATAAATATTTTCTTACTACATTAACACTAAGTAAC
ACAGTCACAGTGGTTCTGTGATGACATTTTTATGCTGTTTCGAATTTCCAAATGAGCCTGGTTTGGTTAAGTGTCGTCATACCTTT
TTATCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002894348 hypothetical protein ARALYDRAFT_474319 [Arabidopsis lyrata subsp. lyrata] | 1219 | 3e-131 |
| NP_175610 putative mitochondrial-processing peptidase subunit alpha-1 [Arabidopsis thaliana] | 1203 | 2e-129 |
| AAM65922 mitochondrial processing peptidase alpha subunit, putative [Arabidopsis thaliana] | 1203 | 2e-129 |
| BAE98617 hypothetical protein [Arabidopsis thaliana] | 1203 | 2e-129 |
| NP_001077701 putative mitochondrial-processing peptidase subunit alpha-1 [Arabidopsis thaliana] | 1203 | 2e-129 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZU25 Probable mitochondrial-processing peptidase subunit alpha-1 | 1203 | 8e-131 |
| O04308 Probable mitochondrial-processing peptidase subunit alpha-2 | 1072 | 1e-115 |
| P29677 Mitochondrial-processing peptidase subunit alpha | 880 | 2e-093 |
| P22695 Cytochrome b-c1 complex subunit 2, mitochondrial | 375 | 8e-035 |
| P32551 Cytochrome b-c1 complex subunit 2, mitochondrial | 373 | 1e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8MQE5 Uncharacterized protein At1g51980.2 | 1203 | 1e-129 |
| Q0WW81 Putative uncharacterized protein At1g51980 | 1203 | 1e-129 |
| B7FNA0 Putative uncharacterized protein | 955 | 7e-101 |
| B9HLW1 Predicted protein | 951 | 2e-100 |
| B8A9G6 Putative uncharacterized protein | 941 | 3e-099 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G51980.1 mitochondrial processing peptidase alpha subunit, putative | 1225 | 2e-134 |
| AT1G51980.2 mitochondrial processing peptidase alpha subunit, putative | 1225 | 2e-134 |
| AT3G16480.1 MPPalpha (mitochondrial processing peptidase alpha subunit); catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding | 1111 | 3e-121 |
| AT3G02090.1 mitochondrial processing peptidase beta subunit, putative | 286 | 1e-025 |
| AT3G02090.2 mitochondrial processing peptidase beta subunit, putative | 286 | 1e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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