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Information for unigene UN16717

FASTA Sequence
Unigene ID: UN16717Length: 1128 SSRSNP
ACCCAAATAACAGTCGATTAAAAGACCAAATTGAATAGCAAATAAACCAGTTTGATTTCAATTTTTCTATGACCACACCATAAAAC
CGGTTCACACACCACTAGATATGTTCAAAATATGGTGATAGATCGTATACAACATCAGTTAAACAGTCATTGAATCACATGATGAA
TCAGAAAATGGCAAATCGATATCCGGTTTAAAGCTTCTTCTGAGCAGCTTTCGTACCGGGAAGTGTTCCAAAGACTCTATCCCAGA
GAGAAGAAGTGATTCCATATCCTTTGTCCTGGATTCTGAAGTGATGGTTCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCT
TTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACATAGCCAAACAAAATGCCTCCAAGCATAGCAGGAGCTGT
AGCAGGAGTAGCTATGAGGTGGAGAAGCTTCCATAGTGGAACCAAGAGGATGGCTGTTGCGGTGGGAGGGAAAACAAGACGAAGGC
CGTCTTGTGGGTGCTTGTGATGGCATCCATGAAGAAGATAGTGTGCAGTGTTTGCCCAGTAGCTCTTGGTTTCTATGTGGAAAAGG
AAACGATGAAGTGTGTACTCGAGCAATGTCCACGTGAATACGCCAAATGCAACTATTAAACCCATCTGGGGAAATGTCAGTCCCCT
CGCCGCGGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGTTGGGATTGCCCACCAAACCGTGCGAGTCAAGAACTCCC
AAAAATCACTCTGGAAAAAACGAGGACCCTCTACGCATACAATAGGTTGATGAATCCATTCCTGATATTCTTCCCCAAGATGACCA
ACCTGAAAGACAAGTGGCTTATCCAAATCGACAGTGAAGCGTTCTGCGACCATCTTTGCCACCCAACCGAGACTCTTGGCTTAGAG
GAAGAACAAACGCGTCTCTCTCTCTCTCTGGGATTGTAAGAGACTCGCTTGCTTCTCTCCAATGAGGGGGAAGGAACAACAACAAC
AGCAACACTCTGTCACACAACGATGGGTTTATTATGCTTCTTCTCTTGATAATGTTCGGCCCACGTTTTTCTCTCTTTTTTTTCCT
TTTTTTCTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193819 fatty acid hydroxylase 2 [Arabidopsis thaliana]12513e-135
XP_002867872 hypothetical protein ARALYDRAFT_914595 [Arabidopsis lyrata subsp. lyrata]12494e-135
XP_002300560 predicted protein [Populus trichocarpa]10059e-107
XP_002330558 predicted protein [Populus trichocarpa]10022e-106
NP_001130161 hypothetical protein LOC100191255 [Zea mays]9762e-103

Swiss-Prot top hits (Blast detail)Scoree value
Q03529 Ceramide very long chain fatty acid hydroxylase SCS74695e-046
O13846 Ceramide very long chain fatty acid hydroxylase-like protein C19G12.084141e-039
Q2LAM0 Fatty acid 2-hydroxylase3494e-032
Q4R4P4 Fatty acid 2-hydroxylase3461e-031
Q7L5A8 Fatty acid 2-hydroxylase3432e-031

TrEMBL top hits (Blast detail)Scoree value
Q9SUC5 AT4g20870/T13K14_3012512e-135
A9PAI4 Predicted protein10056e-107
B9N5R8 Predicted protein10021e-106
B4F857 Putative uncharacterized protein9761e-103
B9SB09 Sphingolipid fatty acid alpha hydroxylase9752e-103

Arabidopsis top hits (Blast detail)Scoree value
AT4G20870.1 FAH2 (FATTY ACID HYDROXYLASE 2); catalytic/ fatty acid alpha-hydroxylase12511e-137
AT2G34770.1 FAH1 (FATTY ACID HYDROXYLASE 1); catalytic/ fatty acid alpha-hydroxylase9704e-105

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  15%
 
65  25%
 
99  45%
 
122  10%
 
81  5%

Unigene MembersMember information