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Information for unigene UN16881

FASTA Sequence
Unigene ID: UN16881Length: 1590 SSRSNP
GGTCGTGTTCGATCTACACCCTCTCTCTCTCTCAAAATGGCAGATCAGGAGGCAGACACGAACATCGAGATCTGGAAAATCAAGAA
ACTAATCAAAGGCCTCGAGTCCGCGAGAGGCAACGGGACGAGCATGATCTCCCTCATCATGCCGCCACGCGACCAGGTCTCCCGCG
TCACCAAGATGCTCGGCGACGAGTACGGAACCGCCTCCAACATCAAGTCCCGAGTCAACCGCCAGTCCGTCCTCTCCGCCATCACC
TCAGCTCAGCAGAGGCTGAAGCTCTACAACAAAGTCCCCACCAACGGGCTCGTCCTCTACACCGGAACCATCGTGAACGACGACGG
CAAGGAGAAGAAAGTCACGTTCGATTTCGAGCCCTTCAGGCCCATTAACGCTTCCTTGTACCTTTGTGATAACAAGTTTCACACTG
GCGCTTTGAATGAGCTGTTGGAGAGTGATGATAAGTTTGGGTTTATCGTGATGGATGGTAACGGGACGTTGTTTGGGACCCTGAGT
GGGAACACGAGAGAGGTTCTTCACAAGTTCACTGTTGATTTGCCGAAGAAGCACGGGAGAGGAGGACAGTCCGCGCTTCGTTTCGC
TAGGCTTAGGATGGAGAAGAGGCATAACTACGTGAGGAAGACCGCGGAGCTCGCGACGCAGTTTTATATCAACCCCGCTACGAGCC
AGCCGAATGTCGCGGGTTTGATCCTTGCCGGTTCGGCTGATTTCAAGACCGAGCTTAGCCAGTCTGAGCTGTTTGATCCGCGTCTT
CAAGCGAAGATACTCAACGTGGTTGATGTTTCCTACGGAGGCGAGAACGGATTCAACCAGGCGATCGAGCTCTCTGCTGAGATTTT
GTCTAACGTGAAGTTCATTCAGGAGAAGAAACTGATCGGGAAGTACTTCGAGGAGATAAGTCAGGACACGGGGAAGTACGTGTTCG
GCGTGGAGGACACTCTGAAGGCTCTGGAGATGGGCGCGATCGAGACGCTGATCGTGTGGGAGAATCTTGATATCAACAGGTACGAG
CTGAAGAACAGCACGAGCGGGGAGATTGTGGTGAAGCATTTCGGGAAAGATCAGGAGACTGATCAGAGCAACTTCCACGACGCGGA
GACTAACGCTGAGCTCGAGGTCCAGGAGAAGATGCCGCTGCTCGAGTGGTTCGCGAACGAGTACAAACGTTTCGGATGCACGCTTG
AGTTCGTGACTAACAAGTCACAGGAAGGGTCGCAGTTTTGCAGAGGGTTTGGTGGGATCGGTGGTATGCTTCGTTACCAGCTTGAC
ATGAGGACGTTTGATGAGTTGTCGGATGGTGACGTGTATGAGGATTCTGATTGAAGTGAGAAAACCTTTTGGTGCTGGTTTCAGAT
CGATACAGTAAGATGGTCTCTTTCTTAAAATTTTATCTTCTCCGACAGTTTGCTAGACAGTTTATGTTGTAATTGATTCTATTTTG
AAGGTTCTGGACATCTTTTTTCGGTTCTAATTTCTGGTTTCAACTATTTTTCACGAGAAAATCAATGGTGAAATGTTTTATATTTG
ATTAGAGTCATTAGACCAATGGAGAGCTAGAGTTAAATTACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACZ71034 eukaryotic release factor 1-2 [Brassica oleracea var. botrytis]22353e-249
NP_172752 peptide chain release factor eRF subunit 1 [Arabidopsis thaliana]21791e-242
XP_002892721 eukaryotic release factor 1-2 [Arabidopsis lyrata subsp. lyrata]21762e-242
NP_189295 peptide chain release factor eRF subunit 1 [Arabidopsis thaliana]21502e-239
XP_002875327 eukaryotic release factor 1-3 [Arabidopsis lyrata subsp. lyrata]21467e-239

Swiss-Prot top hits (Blast detail)Scoree value
Q9LPV8 Eukaryotic peptide chain release factor subunit 1-221794e-244
P35614 Eukaryotic peptide chain release factor subunit 1-321501e-240
Q39097 Eukaryotic peptide chain release factor subunit 1-119269e-215
Q9GR88 Eukaryotic peptide chain release factor subunit 116642e-184
Q9VPH7 Eukaryotic peptide chain release factor subunit 116445e-182

TrEMBL top hits (Blast detail)Scoree value
D2K759 Eukaryotic release factor 1-222352e-249
Q147G8 At1g1292021797e-243
D2K760 Eukaryotic release factor 1-321062e-234
B9IA37 Predicted protein20703e-230
B9GYT2 Predicted protein20685e-230

Arabidopsis top hits (Blast detail)Scoree value
AT1G12920.1 ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2); translation release factor21803e-245
AT3G26618.1 ERF1-3 (eukaryotic release factor 1-3); translation release factor21517e-242
AT5G47880.1 ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor19268e-216
AT5G47880.2 ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor19268e-216

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
182  14%
 
192  14%
 
103  21%
 
84  29%
 
201  7%
 
61  7%
 
121  7%

Unigene MembersMember information