Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN16944

FASTA Sequence
Unigene ID: UN16944Length: 1655  SNP
GGAAACCTCAATAAAACATCCATATCTTTAAACAACATCCAGACCAGAGAGACTGAGAGGAAGCTCTTATCTTCTTCTCCTCCAAT
GTCGAGAGGACCAGGTCGGTTGATACAGAACGTGACACAGTTCGCTGATGCTCAGTTCAAGCAGTTCTCGACTCGCCATGGACAAA
AAGTCATAGACATCCTCGACTTCCCAATCAAACTCGTCTTGTCTCCTTTCACTCTCGCCTTCGACATCGCCGGCTCTGCTCCTCGC
GGCTTTGGCATCCCCGAACTCATCTCCAAGATATCCTATCTCTCTGTTTTCGCGGTTGCTACGCTTGGGACTTATGACATTGCCTT
GGACTTGGGGAAGAAAGTCATCTGCCAAAGGGATTGCAAAACATGTAACGGGTGGCAGGCGTTACGGTGCACCATGTGCAAAGGAA
CAGGGAGTGTTCACTACCAGATCAAAGATTATAACTTGAGAAGTGGAGAGAAGCCAACAGCAGAATGTGTAGCAGATGCCATAGTT
GACAATCGCGCTGAGTTGGTTCATCTCCCTTCCTCCATCAACCTTACTGCACCCTTGCCAACGAAAGACTGTCCAACTTGTGATGG
AACAGGTGTGATGAGCTGTACTGAGTGCAAGAATAAGCTGCAAGTCAGGATCTCAGCTGATGATATCATGGAACCTCCATGGAAAG
CATACAATGTCCTGCGGAAGATGGATTATCCCTACGAGCATATTGTTCACAGCATGAAAGATCCAAGCATCGCAAATTTCTGGTTG
ATCACTTTGCCTCAGATTGTGGGTGGGTTTGATTATGATGAAGATATCAAGAAGAAAATATGGTTGCAATACGAGGAATCAATGCG
CTATGATCAACTTAGGGACTTGGTGGCTAAGAGAAACCCTGGCTGGGAATATTTGCAGGATGCCTTGTTCTCCATTGATCCTGTCC
GTGCTCAGGAAGACCCCGTCATTGTGAAAAATGTACCTTTTTACAAGGCTAAGAAAGCTCTGGAGGCTGAAGTCACAAAGCTCAAT
CCGCCTCCTCGTCCTCAGCACTGGGGTGAACTGAATCTCCCACTGAATACTTCCTCTTGGAGTGAAGAGGATCTCAAAAACCCAGC
AAAGCTGTACGAGAAGACAGTTCTTCTCAATGCGCAAAGGGAAATCGCTGACAAGATCTTGGATGCACAATGGGAAGCTAAATGGC
GTCAAGAGAAGGTAGAGGAAATGCTGGAGGAGAAAGTGAGACCGTTCGTCCAAGACTCAAGCATGTCTGTTCTTCCCCAGCCCATC
TTGTTAAAGTCTCAGAAGACTAATCCAAAGGGGAACCGGCAAAGGAAGTGGTGGTTCTTTTAACCGTCCCGGTTCATCGAAACAGA
GCTAGAGATAAATGGATTTTTGAATCGAGTTTGTGCTTCATTTATGAAAATATGTTTTCACAATTACTTGGTGAGTCTATTACACT
TGTGACTTGAGTCAGTCAATCTTTATATTAAAAATATTTGTTGTTGAGGACATCTTTATATGACCGATTCATCGCGTATTCCACGT
GTACCACTGTTCTTTTTACCTTGTCACGTTGTTCTGCCTCCCATGTTTTGAACTTTGCTGTCGACCATCGTCATCTCCATTACTTA
CGTGTTTTTTCATGCGTGGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864286 EMB2737 [Arabidopsis lyrata subsp. lyrata]21432e-238
NP_568801 protein embryo defective 2737 [Arabidopsis thaliana]21332e-237
XP_002285056 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]17812e-196
XP_002528255 conserved hypothetical protein [Ricinus communis]17595e-194
ACU19010 unknown [Glycine max]16961e-186

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q93W26 AT5g53860/K19P17_221332e-237
B9SQI6 Putative uncharacterized protein17594e-194
C6TB08 Putative uncharacterized protein16967e-187
C0Z2F0 AT5G53860 protein15945e-175
Q2V2Y8 Putative uncharacterized protein At5g53860.315873e-174

Arabidopsis top hits (Blast detail)Scoree value
AT5G53860.2 emb2737 (embryo defective 2737)21346e-240
AT5G53860.3 emb2737 (embryo defective 2737)15872e-176
AT5G53860.1 emb2737 (embryo defective 2737)11543e-126

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  33%
 
94  22%
 
82  11%
 
123  17%
 
112  11%
 
71  6%

Unigene MembersMember information