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Information for unigene UN17015

FASTA Sequence
Unigene ID: UN17015Length: 919  SNP
GTGCAAACGCAGATTAGACTAAACTAGTAGGCTATCAACATACATAACGTAACACTATAGTTGAAACAAGTCATAATCTTGGACGA
GGCATTCTTCACTATGTTGCTAAGAACAAAAAATAGCTTTACTTTTTGGCAGTATTCTGTAACAATTACTGGATAATGTTTTTGCC
GAGTTGGCTACCATTTGCTAGGTTTTTGAAAAAGACAAGGTCTCGTTTGCAGTTTGATTTGATAGCATCCTCTAGTTTATCAACCT
GGTCAAAATCAACCTTGAAGGAAACCATGGTGGTACCATCTTTACCAGTATCATAGTCTTCCTTGATGTCTTCAGCCTGGCATGAC
TGCAGCTGATTGTAAACAACACCTAGAAGATCAAATGTCACCTCGACTCCCATTTGAACTTTAGACTTGAAAAGGCGAGTTGAAGC
AGTTTTCAAGCAATCAGAGGTAACCCCACCATATGCTCTAACAAGACCTCCGGTTCCGAGTTTGATGCCCCCAAAATACCTAATGA
CAACAACCATAACTCTGTCTAATCCAGAGGAACAAATTGCAGACAGCATCGGCTTTCCTGCTGTGCCCGATGGCTCACCATCATCA
CTAGATCGATGTTGATCACCAACCTTATAAGCCCAGCAGTTGTGCGAAGCGCGAGGATCTCGGACCTCGGAGAGGAACAGTTGTGC
CGACTGCTCGGAGGAGATAGGACCGGCGATCGCGATGAATTTGCTCTTCTTAATCTCTTTCTCTAAGGATACGGTTTCTTTGATGG
TCGTGAAGGAATCCGAAGTCATCGAGCTCTTCGTGGATAGCAGACAAGCGGTGGTGATTCGCCGGTGGAGATAGACAACGACGGAG
CCTGCTGCTGCTACTGGTAAGCGCACCAACATCTGATTCCTTCCTTTCCCTTTTTACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866916 hypothetical protein ARALYDRAFT_490803 [Arabidopsis lyrata subsp. lyrata]9393e-099
NP_568034 ribosomal protein S5 domain 2-like family protein [Arabidopsis thaliana]9251e-097
AAM63017 unknown [Arabidopsis thaliana]9242e-097
CAB37549 putative protein [Arabidopsis thaliana]8991e-094
XP_002530693 conserved hypothetical protein [Ricinus communis]7978e-083

Swiss-Prot top hits (Blast detail)Scoree value
P32438 IMPACT family member in pol 5'region (Fragment)3224e-029
P44842 IMPACT family member HI_07222742e-023
P32437 IMPACT family member yvyE2723e-023
P27862 IMPACT family member yigZ2714e-023

TrEMBL top hits (Blast detail)Scoree value
B9DG41 AT4G38090 protein9258e-098
Q8LDU2 Putative uncharacterized protein9241e-097
Q9SZK9 Putative uncharacterized protein AT4g380908998e-095
B9SXH4 Putative uncharacterized protein7976e-083
C6TGW6 Putative uncharacterized protein7861e-081

Arabidopsis top hits (Blast detail)Scoree value
AT4G38090.1 unknown protein9255e-100
AT4G38090.2 unknown protein6862e-072
AT4G38090.3 unknown protein6048e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  9%
 
82  18%
 
102  18%
 
122  18%
 
93  27%
 
111  9%

Unigene MembersMember information