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Information for unigene UN17061

FASTA Sequence
Unigene ID: UN17061Length: 911  SNP
GCTTTGTAAAAATGTTGCTCGACCGCATGTGAAAACTCAAATATATAGAACATAACAGTGGGTTTTGCGGAAAGAGATCCGATTAC
GTGGGGAAGTTCACTCATTACAACAAATGGTTCGAACCACGAAACATACTTGAAAAGAAAGTCTTGAAAGTTTGAAACAAAAGCAC
CACAACATAATAAAGAAAGAAAAATTACATCCCTAATGTCACTTGTGCCTCAGCAAAACCTCACGTGCTTAGCTACCGTCTATGCC
AAAGCCATCCTAGGCAAGGTCGAGACGAAGGAGACGGTAATCAAAGCGATGGCTAGAGCCACAACGAGGTGACCATCTTTTATGGA
AGCTGATCCTCCTTTCTCCGCAGACGTCGCTGGAGTTGCCGGAGACTTCCCTGCCGGCGCCTCCGGTGTCATTGTTGTGGCATTGC
TTGTGAATACGGCTGCGTCTGGCGAGCTCGGCGAAATCCCGAGAAGCTTTGGACAATTGGAGATGCTAGCGTTTTGGAGCTGACAA
GCAGTTGGAAGTTGAATAAGCTTGGCTTCTTGAACACCAAGATCCTTCATAGCTTGTCCTCCTGTCTTCGCTTGTTGTACCAAGAA
ACACAAACACTTTGGATCCTTCTCTTTTATATCTTCGATAGCGTCACAACACTTCTCAGACGGTTTTGGTGCTTTCCCGGTCGCGA
AATCCAAACACAAACTTACCTTTGGAATAACTTGGCTACATTTCTCAGCCAATGCTCCTCCGCCCGCCGGAGCGGCTGGTGTTTCC
GCGGAGATGGATGCAGCGACCGTCATGGTGACTAGGAAGAGGTGGAAATGAAGACCCTTCATTATCAGATTCTTTCTCTAGCTTTT
TCTTGCTCTCCTTTTTTTTTTTGTTGCAACTTTGATTGTATTTAAAAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890752 hypothetical protein ARALYDRAFT_890328 [Arabidopsis lyrata subsp. lyrata]8221e-085
AAM62634 lipid transfer protein, putative [Arabidopsis thaliana]7645e-079
NP_174116 glycosylphosphatidylinositol-anchored lipid protein transfer 1 [Arabidopsis thaliana]7629e-079
ABI81469 lipid transfer protein-like protein [Noccaea caerulescens]4601e-043
ACU13575 unknown [Glycine max]4115e-038

Swiss-Prot top hits (Blast detail)Scoree value
Q9C7F7 Uncharacterized GPI-anchored protein At1g279507723e-081

TrEMBL top hits (Blast detail)Scoree value
Q06AI8 Lipid transfer protein-like protein (Fragment)4607e-044
C6SWF2 Putative uncharacterized protein4113e-038
B9RMD9 Non-specific lipid-transfer protein4061e-037
B9GZQ5 Predicted protein4042e-037
C6SWC4 Putative uncharacterized protein4033e-037

Arabidopsis top hits (Blast detail)Scoree value
AT1G27950.1 LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1)7723e-082
AT2G44290.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)2078e-017
AT2G44300.1 lipid transfer protein-related1853e-014
AT1G36150.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein1262e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1012  55%
 
72  9%
 
112  9%
 
191  5%
 
123  14%
 
62  9%

Unigene MembersMember information