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Information for unigene UN17074
| FASTA Sequence |
| Unigene ID: UN17074 | Length: 1113 |
| SNP | GGAAAGAAAAAAAAAAAACAAATCACCAATTTCTCTCAAAGGCCAATCAATCTCAGTGATCTACTTGCAAAAGTCTCCTCGAGAGG
CCCAGTAGTTAACATGGCTGGCCAAAACGCGCGTTTGAATGTGGTTCCCACTGTTACTATGCTCGGAGTTATGAAAGCCCGTCTTG
TTGGAGCCACAAGAGGCCATGCTCTCCTCAAGAAGAAGAGCGATGCTTTAACTGTTCAGTTCAGGGCTCTTCTCAAGAAAATCGTC
ACGGCCAAGGAATCAATGGGAGACATGATGAAGACATCGTCTTTTGCTCTTACCGAAGTCAAGTACGTTGCTGGTGAGAATGTCAA
ACACGTTGTCCTCGAGAACGTCAAAGAAGCTACGCTCAAAGTCCGTTCAAGGCAAGAGAACATCGCTGGTGTGAAGCTTCCGAAGT
TTGATCACTTCTCTGAAGGCGAGACCAAGAATGACTTAACCGGTTTAGCTAGAGGTGGTCAACAGGTCCAAGCTTGCCGTGTCGCT
TATGTGAAAGCCATTGAGGTTCTCGTTGAGCTTGCTTCTCTCCAGACTTCGTTCTTGACGCTTGATGAAGCAATCAAGACGACGAA
CCGCAGGGTCAACGCTCTGGAGAATGTGGTGAAACCGAAGATTGAGAATACCCTCAGTTACATCAAGGGAGAGCTTGACGAGCTTG
AGAGGGAAGATTTCTTCAGGCTTAAGAAGATTCAGGGATACAAGAGGAGGGAAGTCGAGAGACAAGCTGCTAACGCTAAGGCGTTT
GCTGAGGAGATGGTTCTTGAAGGAATCTCTATGCAGAGAGGGATTTCTATAAACGCTGCTCGTAACTTGCTTGAAGGTGGGGCAGA
GAAGGATGCAGACATTATTTTCTAAAGTGTGAGGCTCTCTCGCTATTTATCTTTTGTTATTATTACTCTCTTCATAAGACTTCATG
TTTCTACAAATAAAATGGATTTGATGTAGATGAAATACTGTATCATCTTGGATTGTGCTTTGCTATAATTTTCCTCTGAGAGATTT
GTGATTGTTACTCTTCTGCGTTATGATAAATGTAAAACGTTACCTTGCTTATAGACCAACTTGTCTGGTATTGATTCTTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878236 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1240 | 5e-134 |
| NP_191432 V-type proton ATPase subunit D [Arabidopsis thaliana] | 1234 | 2e-133 |
| CAB46439 v-ATPase subunit D [Arabidopsis thaliana] | 1230 | 7e-133 |
| XP_002523036 ATP synthase subunit d, putative [Ricinus communis] | 1087 | 3e-116 |
| XP_002282632 PREDICTED: hypothetical protein [Vitis vinifera] | 1075 | 6e-115 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XGM1 V-type proton ATPase subunit D | 1234 | 1e-134 |
| P87220 V-type proton ATPase subunit D | 607 | 5e-062 |
| Q86A77 V-type proton ATPase subunit D | 606 | 7e-062 |
| Q61IU3 V-type proton ATPase subunit D | 580 | 7e-059 |
| O59941 V-type proton ATPase subunit D | 580 | 7e-059 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WWD3 Vacuolar-type H+-ATPase (V-ATPase) subunit D | 1234 | 2e-133 |
| B9SAL7 ATP synthase subunit d, putative | 1087 | 2e-116 |
| B9T370 ATP synthase subunit d, putative | 1074 | 6e-115 |
| B9GJS3 Predicted protein | 1059 | 3e-113 |
| D6PQJ5 AT3G58730-like protein (Fragment) | 878 | 3e-092 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G58730.1 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) | 1235 | 7e-136 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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