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Information for unigene UN17157

FASTA Sequence
Unigene ID: UN17157Length: 1237  SNP
GGATCAAAACACATGTACATACATTTATATATGCATATATCAAGTAGTGATTGACATTAACCGACAGACACATGCTCTAGTAGGGA
TCAATAACAGACACATACATACATGTTTATATATGCATATGTCAATTAGTGATTGATCATTAAGCCGACAGACACATGCTGGGCAA
TAAATATGACACAAACACAGAGATATTTTCAGTTTCCTCTCTTTTGGTCACATTACATTTTTTCCACACCTTACTGGTAACATAAT
ACTATTGCCCTAGATACCCATCAAGTATTTAAATTACAACACGCATATAGGAGATAGAAATACATAAAAATCATAAAAATGCAGAT
CAAGAACCCGTCATATGGACATTGATGGTTCTTTTTTTCTTCTTATTATAAAATTCATGATCTGTTCTTGCAGTACTTCTCCATTG
CTCTGGGAGCAAGTCCAATTGCTTCAGATCCCTTCATGATGCGCAAACGTTTGCACGACTGGACGAACATTTCCCATGGGACATCT
CCGACGAGCATCCAATCGCCATCTTTGTCCTCGTAGCTTGGAACATATTCGGAACTGTTCAACAGATTCATGAGCTTGCTCTCGTT
CATGAAATCTATCATTCCTTGTGCTCCATAGTTTCCCATAGTGAAGGAGCTGAACATTTTGGCCAAAGCATCAGAGAGATCCTGAT
AGCTTTTGTACATCGTGAGGTTAACTTTTCTTAGGTAAGGAGCTCCATCCATGGATACCTTCACCAAGGCAGCTCCTCCACCATTT
CCGGCCTTCTCGCTGCTGGCCTCCTCTTCGGCGCTTGTTTTCTGCTGAGTCATCATGTTCTTCCTGTAGTTCCTCACAGGTGGCCA
TCCCACCACTTGGGCTTTAGCAGGAGGCTTAGCAGGGTCTTTGAGGAGAGTCTTCTCTTTGGAAGCTGTGGCGTTGTTAAGATCGA
CGGTTTCTTCTTTGTTGCACTGAAGATTGAGCATGAGATCCACGGTCTCGGAGAAGCCTCTCTTGTTCCTCACCGACGATCTGGCC
GGGCTTTCGACGGCTTTAGTGCCGCCAGGGAGGCCGAGACAGAGCTCCGTCGCGTTAAGGTTCATAAGCTGTCCGATCATGTTACT
TCTAATAGATTAGAGATGTTATTTATTTCTCTGATTTGGTCAGAGGGGAAGAAGAAGAGAGAGGAGATAGCAATAATAATATAAGG
AGAGAAAATGGCGGTGGGGTGTATTATGTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33997 unnamed protein product [Thellungiella halophila]10982e-117
XP_002883395 hypothetical protein ARALYDRAFT_319024 [Arabidopsis lyrata subsp. lyrata]10864e-116
NP_188945 auxin-responsive protein IAA7 [Arabidopsis thaliana]10722e-114
BAF81520 auxin-responsive protein IAA [Brassica rapa]10542e-112
AAM65301 indoleacetic acid (IAA)-inducible gene (IAA7) [Arabidopsis thaliana]10498e-112

Swiss-Prot top hits (Blast detail)Scoree value
Q38825 Auxin-responsive protein IAA710727e-116
Q38832 Auxin-responsive protein IAA149401e-100
O24407 Auxin-responsive protein IAA167375e-077
P13089 Auxin-induced protein AUX286651e-068
P0C132 Auxin-responsive protein IAA305987e-061

TrEMBL top hits (Blast detail)Scoree value
A8CF53 Auxin-responsive protein IAA10541e-112
Q0WRB1 IAA149261e-097
D2DGW4 Aux/IAA protein8821e-092
A9PH58 Predicted protein8247e-086
B9A8D8 Indole-3-acetic acid 14 transcription factor like7898e-082

Arabidopsis top hits (Blast detail)Scoree value
AT3G23050.1 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor10735e-117
AT4G14550.1 IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor9444e-102
AT3G23050.2 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor9061e-097
AT3G04730.1 IAA16; transcription factor7412e-078
AT1G04250.1 AXR3 (AUXIN RESISTANT 3); transcription factor5422e-055

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  9%
 
914  33%
 
1213  30%
 
66  14%
 
85  12%
 
111  2%

Unigene MembersMember information