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Information for unigene UN17293
| FASTA Sequence |
| Unigene ID: UN17293 | Length: 731 |
| SNP | GGAACGTTGAAAAATCAAACAGGGGCCTCAATTTAACGAGAGCAGACCAACGAAATTGGTAAAGAAACCGAAATCTTGAGTATTGT
AGAGAAAAAAAGAAATGACTCTCAAGAAGCTGGACGCAGATCCCTCAACCTTGGAGACGGTGTTGGAAGAATTGAAATCTGACGAA
TCAAACCGTAACAAGATCAATTTCATCCTCTTCCTCGCCAACAATGAACCCAACACCAACCGCAGCTGGTGTCCTGATTGCGTTAG
GGCTGAGCCTGTGATTTACAAGACTCTAGAGGAATCACCGGAGGAAGTGAATCTTATTCGGGCTTACGCCGGAGATAGACCGACGT
GGAGGAATCCGATGCATCCGTGGAGAGTCGATCCTCGATTCAAGGTCACCGGAGTGCCAACACTTGTTCGCTGGGATGGAGACAGT
GTTAAGGGTCGTCTTGAGGATCACCAGGCTCATGTTCCTAACTTGATTCGCCCACTTCTTGCACCATCCACTTAATTCGATAAGGG
ACTATGGCTGGATCGATGATCAAGTTTATGAATCGCTAGTTTTCTGTTGCTTTCCAATAAACCCTTGAAAATAAAACGGAGCACCG
AAAGTTTGTGTGTTTTGGTTTTGTATGATTTGGTATTTGTTTCTTGCTCAATGTATCGTTGCATACTCTTGCTTCTCGACTTAATA
ATAATGCACACTATTTGGGTGTTCGCTTACAATTAAAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863728 hypothetical protein ARALYDRAFT_917431 [Arabidopsis lyrata subsp. lyrata] | 646 | 2e-065 |
| AAM64350 unknown [Arabidopsis thaliana] | 635 | 3e-064 |
| NP_568614 thioredoxin-like protein Clot [Arabidopsis thaliana] | 616 | 5e-062 |
| ACU13745 unknown [Glycine max] | 472 | 3e-045 |
| XP_002513195 electron transporter, putative [Ricinus communis] | 450 | 9e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FMN4 Thioredoxin-like protein Clot | 616 | 2e-063 |
| Q5Z9Z3 Thioredoxin-like protein Clot | 325 | 1e-029 |
| Q6DBT3 Thioredoxin domain-containing protein 17 | 158 | 3e-010 |
| Q9CQM5 Thioredoxin domain-containing protein 17 | 154 | 9e-010 |
| Q5REA8 Thioredoxin domain-containing protein 17 | 148 | 5e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6SWX2 Putative uncharacterized protein | 472 | 2e-045 |
| B9RHH6 Electron transporter, putative | 450 | 6e-043 |
| A9PBT3 Predicted protein | 442 | 5e-042 |
| A9NLL0 Putative uncharacterized protein | 372 | 7e-034 |
| C0PSG7 Putative uncharacterized protein | 371 | 9e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42850.1 INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF953, thioredoxin-like (InterPro:IPR010357); Has 237 Blast hits to 237 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 174; Fungi - 29; Plants - 21; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | 617 | 2e-064 |
| AT5G42850.2 INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Protein of unknown function DUF953, thioredoxin-like (InterPro:IPR010357); Has 237 Blast hits to 237 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 174; Fungi - 29; Plants - 21; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | 617 | 2e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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