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Information for unigene UN17354

FASTA Sequence
Unigene ID: UN17354Length: 1015  SNP
GCACGCTTTCAAACGACTCTAGGATTGTATATTAAAAGGGTTTTGGGGGGGGAAACAACAGCAAACAAGCTGGCTTTACAAGTGCT
TAAACAAAAGACTGCTACGACAGAGAGCAGAAACCAAATCAAGAAACAGAATCCGAGTCATGGAGCTAAAAACAAAAAAAAAAAAA
TCAAAGAGATTACAGAGCAACAGCAATACTCTGCTCGAGCTTATATTACTCTAGATCTCACTGTAGTTACGCCACACTGCTCGAAA
TTCCTCCCTGAAGGTGTTAAGACGTGCCTTCAAGTTGGGTGTTCTCAAGGTTGCATGAAGAATCGTAGCAAGAAGCCCAATGAGTA
GTGCCAAAGAGACAGTGAACAAACCACATGAGATATACCAAAGGGCAAAACTCACAAGTGAGGATACCAAGACAAAGACCCAACGG
GGTTGGCCACAGATATAGATTGCTCTCTTAGCTGATGGACGTCCACGGATGACAGGCGCCAATGGAGGTCTCATTTTAGCAGCTAA
AGGTGGGGAGAATCTTCTGATGGTTCGTGTGGCCTTCTCACTAAAGGAACCTGCAAAGCTGTCATTTAGGAATGCCACAGTTAGTG
CTGTCAAAAGGGCAGAGAGAATGGCGAGAGGCCTTGTAAGAAATCCCAATCCAAGTATAAAGACGATCATGATGAAGTAGTTCGTT
CGGTAGTAGTAGAGATTGCACTTGAGGCGGCTATCCCATTTAGCGAAAGATTTAGGAACGGTGAACCTTGAGAAGAACTCCGATAG
CGGACGCGGCGGCGACGACCAGTCAACCTCTCGTAGAGCATCCACCAGATCCTCAACCGTCACATTTCCCCAATCCATTCTCTCCG
ATCACAAAACTCAACTCTCTTAATCAATCTTTGCAATCGCCAACAACAATCTATCGATTACGAATTTACGATCAAATCAAAGCTTC
CTCGAAGAGAAGACAAGAGAGAGAAGATGAACCAAAACTGATTTCGTGCGGAGATTGATCGTATTTGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870948 prenylated rab acceptor family protein [Arabidopsis lyrata subsp. lyrata]10182e-108
NP_195824 PRA1-like protein A1 [Arabidopsis thaliana]9449e-100
AAM63057 unknown [Arabidopsis thaliana]9367e-099
XP_002309088 predicted protein [Populus trichocarpa]9286e-098
XP_002273794 PREDICTED: hypothetical protein [Vitis vinifera]9223e-097

Swiss-Prot top hits (Blast detail)Scoree value
Q9LZM7 PRA1 family protein A19444e-101
Q8GWC3 PRA1 family protein A27851e-082
Q8W115 PRA1 family protein A37813e-082

TrEMBL top hits (Blast detail)Scoree value
B9HC48 Predicted protein9284e-098
A5BDN4 Putative uncharacterized protein9186e-097
C6T337 Putative uncharacterized protein9151e-096
C5XPS8 Putative uncharacterized protein Sb03g0398108631e-090
B8AC40 Putative uncharacterized protein8594e-090

Arabidopsis top hits (Blast detail)Scoree value
AT5G02040.1 PRA1.A1 (PRENYLATED RAB ACCEPTOR 1.A1)9453e-102
AT5G02040.2 PRA1.A1 (PRENYLATED RAB ACCEPTOR 1.A1)9453e-102
AT5G05987.1 PRA1.A2 (PRENYLATED RAB ACCEPTOR 1.A2)7867e-084
AT3G11397.1 PRA1.A3 (PRENYLATED RAB ACCEPTOR 1.A3)7822e-083

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  25%
 
181  13%
 
121  13%
 
63  38%
 
91  13%

Unigene MembersMember information