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Information for unigene UN17423

FASTA Sequence
Unigene ID: UN17423Length: 1479  SNP
CTACGAGTATCGGCGACGTTTCGGTATATGTACCTGGTTTAAGGATACCTAAGCCTGTGGAGTTTTCTCAGTCTCTCGGTGATCAT
TTGCCCAAGACTCTTGTCGAGCGGTTAACTGCTTTGAGGACGCGGATTGTTGTGATGGCGAACCAAGAAGGACCAACCATAACAAG
AACTAGGAGGAAGACACAACATTGAGGTTCAACGCTTGCAGATCTCCATCAAGCTTTGGAAGATTATCTACCTGTTCTATTAGGAT
TAACTAAAGATGGTAGCCAATTACAGTTCAAAGTACAGTTTAACTGGATAAATCAGGAGGATGAGGAAGAGGAAACAGCCATGTTA
AGCGTTTGGTATGAAATATTGTCGGTTTTGCATCTAATGGCAATGCTACAAATGTCACAAGCCAATTTGCTGCTGCTTCCTAGAGG
TTCTACTGATGGCTACCATCCAAAAGTATCCGAAGAAAACAGACGAGCTTCAATTGATATCTTCTTAAAGGCAGCTGGATATCTTG
ACTGCGCTGTCAAGCATGTCCTCCCTCAGTTTTCAGCCGAGCAAAGGAGAAGTTTACCTGTTGACCTAGCAGAAGGAGCTCTACGG
GCTCTTTGCCTGCAAGCATTAGGCCAGGGTGTTGATATCCAACTTGGTATTGCGATTGATAGCTCAAAAGCCACTCTCGCAGTGAA
GCGAAGACTTTCATGTGAAATGGTGAAATACTGGCAGCAGGCACAGGATAACTTGATGAATCTCCCATTAGCAAATGGCTGGGGAG
AAAAGCATATGCTCTTTGTCAAGTGGAAACATGTTGAAGCTAAGGCTGCAGCGTACTACTACCATGGATTGATTCTTGATGAAGGA
AACACAGAGAAATCACATGGCATGGCGGTTGCTGCCTTGCAAGCTGCAGATGAGTGTTTCAAAGAAAGTAAGAAAGCAAGTGAGGC
ATTCAATGCATCTTCACCCACGTCAAGGACTCCACCGCTTTTCGGGACAATGAAGTACCTATCAGAGAAAATACCGAAAGAAACTT
CAAGTAAAGTCAGGATAAACCGTGATCTATACTCATATGAGAAAATCATGGAGACGGCACCAACTCTTCCTGATTTTGCCTTGGCA
TTGAAACCTGATGAGTACCAACTCCCTTCTATAGATGCATCATGGTCCGAAGACAGGACTAAAATCTCATCGAATCACATTACAGG
AAACCAAAGATAGAGCAGTGGATAGAATGAATGTTACCTTAGTAGAGAACAAAGCCACAGTGGCCGCCATATAAATACCAAATGGT
ATTAGCTCTCTCTATAAACTACTCTTATGATTCTCCAAGTGTTGATAATATATGTAAGAAAAGCTCTCTTTGTGTGCAAACCTTCC
AAACTGGATTTGTATAAGTTTCCAGAAAAAAAAAATCAAGGGAACATGTCGTCTGTATTCTGTGATTGTTTAGTGCAATAAAATCA
TATTCTTTCGCAAAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888928 hypothetical protein ARALYDRAFT_895200 [Arabidopsis lyrata subsp. lyrata]19531e-216
NP_177482 Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]19324e-214
XP_002892974 hypothetical protein ARALYDRAFT_889205 [Arabidopsis lyrata subsp. lyrata]18276e-202
NP_173236 Endosomal targeting BRO1-like domain-containing protein [Arabidopsis thaliana]18241e-201
AAZ23936 At1g17940 [Arabidopsis thaliana]18232e-201

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FX34 At1g7339019323e-214
Q9LMT6 At1g1794018292e-202
Q494N2 At1g1794018283e-202
A9PHX3 Predicted protein16724e-184
B9S0R0 Putative uncharacterized protein16715e-184

Arabidopsis top hits (Blast detail)Scoree value
AT1G73390.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17940.1); Has 95 Blast hits to 95 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 23; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).19321e-216
AT1G73390.2 FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17940.1); Has 95 Blast hits to 95 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 23; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).19321e-216
AT1G73390.3 FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17940.1); Has 95 Blast hits to 95 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 23; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).19321e-216
AT1G17940.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73390.3); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 22; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).18291e-204
AT1G73390.4 unknown protein15834e-176

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  11%
 
92  22%
 
81  11%
 
192  22%
 
182  22%
 
41  11%

Unigene MembersMember information