 |
Information for unigene UN17512
FASTA Sequence |
Unigene ID: UN17512 | Length: 1891 |
| SNP | GGACATTTCGCCGGCTCTCCTGTTCATCCCTCTCTACAAAGAGCCAAGTTTCTCTTTCTCTCTCTCTAACAAAAATGGCGATGGCG
AATTTAGCAAGAAGGAAGGCTTATTTTCTCACAAGAAACGTAACTAACTCTCACACTGACGCTCTTAGATTCTCCTTCTCCCTCTC
GCGTGGCTTTGCGTCGTCGGGATCTGATGAGAACGACGTCGTCGTCATCGGCGGCGGTCCAGGCGGTTACGTGGCGGCGATCAAGG
CGGCTCAGCTCGGTCTCAAAACCACGTGTATCGAGAAGCGCGGCGCACTCGGTGGTACTTGTCTCAACGTCGGATGTATTCCCTCT
AAGGCTCTTCTTCACTCTTCACATATGTACCATGAGGCGAAACACGCTTTTGCCCATCACGGTATCAAGGTGGCTTCAGTTGAGGT
TGATCTTCCTGCTATGTTGGCTCAGAAAGACAATGCGGTCAAGGGCCTCACTCGTGGCATTGAGGGTTTGTTCAAGAAGAACAAGG
TTACCTATGTCAAGGGGTATGGTAAGTTTCTTTCCCCTAATGAAGTCTCTGTTGAGACTATCGATGGAGGAAACACCGTTGTCAAA
GGCAAGCACATCATTGTTGCTACCGGCTCTGACGTCAAGTCTTTGCCTGGTATTACAATCGATGAGAAGAAGATTGTTTCGTCGAC
TGGAGCCTTGTCTTTGTCTGAAGTCCCCAAGAAACTGATTGTGATTGGTGCTGGATATATTGGGCTGGAGATGGGTTCTGTTTGGG
GAAGGCTTGGATCAGAGGTCACGGTGGTTGAGTTTGCTGCGGATATCGTTCCTTCTATGGATGGTGAGATCCGTAAGCAGTTTCAG
CGTTCTCTTGAGAAGCAAAAGATGAAGTTCATGCTCAAGACTAAAGTTGTATCCGTGGACGCCTCTGGAGACGGTGTGAAGCTCAC
GGTGGAGCCAGCTGAAGGTGGAGAGCAGACCACACTCGAAGCCGATGTTGTCCTTGTCTCAGCGGGGAGAACGCCCTTCACTTCTG
GACTTGATCTTGAGAAAATCGGAGTGGAAACTGACAAAGGTGGAAGAATTTTGGTGAACGAGAGGTTCTTGACCAATGTCTCGGGA
GTGTATGCGATTGGAGATGTGATTCCAGGACCAATGCTTGCTCACAAAGCTGAAGAAGACGGTGTTGCTTGTGTGGAGTTCATAGC
AGGCAAACACGGCCATGTGGATTACGACAAGGTTCCTGGTGTTTGCTACACGCATCCAGAGGTTGCTTCGGTCGGTAAAACCGAAG
AACAGTTGAAGAAAGACGGTGTGAGCTATCGTGTTGGGAAGTTCCCGTTTATGGCTAATAGTAGAGCTAAGGCCATAGATAATGCT
GAAGGATTGGTTAAGATTTTGGCTGATAAGGAGACGGATAAGATCTTGGGCGTTCACATTATGTCTCCAAACGCTGGAGAGCTGAT
CCATGAGGCTGTTCTTGCGATAAACTATGACGCATCAAGTGAAGATATTGCTCGAGTCTGCCACGCTCATCCCACTATGAGTGAGG
CTCTCAAGGAAGCTGCCATGGCCACCTATGACAAGCCGATTCACATCTAAATGCAAACAGAATAGGAGGACCGACCGTAAAGGAGA
GAGCCAGCCACCGATGCAAAGACTATTCTATATCTTAACCGGGTTGGATTTGGTTCGGTTTTCTGTGGTTTATCCTTCACTTTTAT
CCTTTCATTTTCTGGTGGATTTTATTCGTTAGTTTTCTTTACAAATGTTCAGATTCGGGCTTAGGCCTGATCCGTAATAATACTTC
TACATTCACTCTACTCATTTTGGTTTATTGAGTAAACCAAGTTCGGTTCGAGTTCTGATTTACGTTTAACCCCCAACTTTTATCT
|
|
|
GenBank top hits (Blast detail) | Score | e value |
BAJ34204 unnamed protein product [Thellungiella halophila] | 2516 | 1e-281 |
XP_002894091 F21D18.28 [Arabidopsis lyrata subsp. lyrata] | 2480 | 2e-277 |
NP_175237 dihydrolipoyl dehydrogenase 1 [Arabidopsis thaliana] | 2472 | 1e-276 |
AAF79529 F21D18.28 [Arabidopsis thaliana] | 2463 | 1e-275 |
NP_851005 dihydrolipoyl dehydrogenase 2 [Arabidopsis thaliana] | 2429 | 1e-271 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9M5K3 Dihydrolipoyl dehydrogenase 1, mitochondrial | 2472 | 6e-278 |
Q9M5K2 Dihydrolipoyl dehydrogenase 2, mitochondrial | 2429 | 5e-273 |
P31023 Dihydrolipoyl dehydrogenase, mitochondrial | 2187 | 6e-245 |
Q54EW8 Dihydrolipoyl dehydrogenase, mitochondrial | 1496 | 8e-165 |
O00087 Dihydrolipoyl dehydrogenase, mitochondrial | 1425 | 1e-156 |
TrEMBL top hits (Blast detail) | Score | e value |
B9RZW7 Dihydrolipoyl dehydrogenase | 2287 | 3e-255 |
D2D319 Dihydrolipoyl dehydrogenase | 2283 | 8e-255 |
Q93WQ1 Dihydrolipoyl dehydrogenase | 2257 | 8e-252 |
A9PL03 Dihydrolipoyl dehydrogenase | 2240 | 7e-250 |
B9HIJ5 Dihydrolipoyl dehydrogenase | 2234 | 4e-249 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G48030.1 mtLPD1 (mitochondrial lipoamide dehydrogenase 1); ATP binding / dihydrolipoyl dehydrogenase | 2473 | 4e-279 |
AT1G48030.2 mtLPD1 (mitochondrial lipoamide dehydrogenase 1); ATP binding / dihydrolipoyl dehydrogenase | 2473 | 4e-279 |
AT3G17240.1 mtLPD2 (LIPOAMIDE DEHYDROGENASE 2); ATP binding / dihydrolipoyl dehydrogenase | 2430 | 4e-274 |
AT3G17240.3 mtLPD2 (LIPOAMIDE DEHYDROGENASE 2); ATP binding / dihydrolipoyl dehydrogenase | 2430 | 4e-274 |
AT3G16950.2 LPD1 (LIPOAMIDE DEHYDROGENASE 1); dihydrolipoyl dehydrogenase | 731 | 4e-077 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|