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Information for unigene UN17608
| FASTA Sequence |
| Unigene ID: UN17608 | Length: 1425 |
SSR | SNP | GGACTGAAGTAGCCTATATATTACATATACAAAGTCTTATTACTATATTGTAAAATACATCTCACTCTCACTAACTTCTCTTCACC
CGAAAATGTCGACCGCTCCTCTCTCCGGCTTCTTCCTCACCTCTCTTTCTCCTTCTCAACCTTCACTCCAAAAACTCTCTCTTCGT
TCCTCTCCCGCCGTTGCTTGCCTTCCCTCATCCTCTTCTTCTTCTTCTTCTTCCTCCTCCCCCTCTCGTTCCGTTCCAACACTTAT
CCGTAACGAGCCCGTTTTTGCCGCTCCTGCTCCTATCATCACCCCTTATTGGAGCGAAGAGATGGGTAGCGAAGCATACGAAGAGG
CCATTGAAGCTCTCAAGAAGCTTATTATCGAGAAGGAGGAGCTAAAGACTGTTGCGGCCGCTAAGGTGGAGCAGGTCACGGCAGCA
CTTCAGACAGGTACTTCCTCCGACAAGAAAGCTTTTGACCCCGTCGAAAACATTAAGCAAGGCTTCATCACTTTCAAGAAGGAGAA
ATACGAAACCAACCCTGCTTTGTACGGTGAGCTCGCCAAGGGTCAGAGTCCTAAGTACATGGTGTTTGCTTGTTCCGACTCGCGTG
TGTGTCCATCGCACGTTCTCAACTTTCAGCCAGGAGAGGCCTTCGTTGTCCGTAACATAGCCAACATGGTTCCTCCTTTTGACAAG
GTCAAATACGGTGGAGTAGGAGCAGCCATCGAATACGCTGTTTTGCACCTTAAGGTGGAGAACATTGTGGTGATAGGACACAGCGC
TTGTGGTGGGATCAAGGGACTCATGTCTTTTCCTTTGGATGGAAACAACTCCACTGATTTCATAGAGGACTGGGTCAAAATCTGTT
TACCAGCCAAGTCAAAAGTCATATCAGAACTTGGGGAGTCAGCCTTTGAGGACCAGTGTGGCCGATGTGAAAGGGAGGCAGTGAAT
GTTTCACTAGCAAACTTGTTGACTTATCCATTCGTGAGAGAAGGACTTGTGAAAGGAACACTTGCTTTGAAGGGAGGCTACTATGA
TTTTATAAAGGGTGCTTTTGAGCTTTGGGGACTTGAGTTTGGCCTCTCCGAAACTAGCTCAGTATGAACCAATCCACCATCATCAT
CATGAGCATCCATCATCATCATATATCTCATTTACATATGTAATTTGTAATGTGCTGAGTTGTTTTCCAATCTTCATGGTATTCAA
CTTTCATATAAATAAAAAAGAAAACTCAGATGATATATAGATCTTTTTTTTGAGGAGGGGGGGGGGAGGGGCGTTAATTATGAATA
ATTGTGTTTATATTATGTGCATCAAATCGGTTGTATCTACGGTTTGATTTCATTTTCTATGTTGTTTGATAGGTTAAAGATGTGGC
CACCATACTACATTGGAAGCTGTAGGAAATCTTTCAAACTTTTATCCCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882178 hypothetical protein ARALYDRAFT_477371 [Arabidopsis lyrata subsp. lyrata] | 1651 | 1e-181 |
| ADI52861 chloroplast beta-carbonic anhydrase [Brassica napus] | 1638 | 5e-180 |
| BAJ33678 unnamed protein product [Thellungiella halophila] | 1632 | 2e-179 |
| NP_186799 carbonic anhydrase 1 [Arabidopsis thaliana] | 1626 | 1e-178 |
| NP_850491 carbonic anhydrase 1 [Arabidopsis thaliana] | 1626 | 1e-178 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P27140 Carbonic anhydrase, chloroplastic | 1626 | 5e-180 |
| P42737 Carbonic anhydrase 2, chloroplastic | 1179 | 3e-128 |
| P46512 Carbonic anhydrase 1 | 1130 | 2e-122 |
| P46511 Carbonic anhydrase | 1123 | 1e-121 |
| P27141 Carbonic anhydrase, chloroplastic | 1122 | 1e-121 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6Q9W7 Carbonic anhydrase | 1615 | 2e-177 |
| C0Z272 Carbonic anhydrase | 1352 | 5e-147 |
| Q56X90 Carbonic anhydrase | 1304 | 2e-141 |
| B9DHN2 Carbonic anhydrase (Fragment) | 1179 | 5e-127 |
| Q3E9H5 Carbonic anhydrase | 1179 | 5e-127 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G01500.3 CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding | 1627 | 3e-181 |
| AT3G01500.2 CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding | 1626 | 4e-181 |
| AT3G01500.1 CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding | 1301 | 2e-143 |
| AT5G14740.1 CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding | 1180 | 2e-129 |
| AT5G14740.2 CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding | 1180 | 2e-129 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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