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Information for unigene UN17651
FASTA Sequence |
Unigene ID: UN17651 | Length: 1523 |
| SNP | ACTTGAATCTCAATTACAAATCAAAGATCAAGACAGCCTACTTGTCGGATAAGAAAAACAGAGGATTTTTGTTATCACTTTTTGTG
TCGCCGGAGATAAAAAGACGATGGCGAGTGTGCCGGAGATAAAGATAGTGAGGAGCGAGAGCTTAGGGCATCGAAGTGAGGTGTCG
AGCCCGGAAGCTAAGCTAGGGATGCGTGTGGAAGATCTATGGGATGAGCAGAAACCACAGCTCAGCCCTAACGAGAAGCTCAACGC
ATGTTTCGAGAGCATCCCTGTCTCTGCTTTCCCTCTCTCCTCTGATTCACAAGACATCGAGTTGAGATCAGACACAAGCTTGGCTG
AAGCTGTTGAGACACTGTCGAAACTCAAGGTGTTGAGCGCTCCTGTTGTAGATGTTGACGCTCCTGAAGACGCCAGCTGGATTGAC
CGCTACATCGGTATTGTGGAGTTTCCAGGCATTGTTGTCTGGCTTTTGCATCAGTTGGACCCAACATCTCCAAGGAGCCCCGCTGT
TGCAGGTTCAAATGGAGTTTCTCATGACTTCACCGCCGATATCCTGGATAATGGAGATTCAGCTGTAACTTCTGGAAACTTCTTTG
AGGTCCTTACTTCTTCAGAGCTATACAAGAACACCAAGGTTCGAGATATCTCTGGAACATTCAGATGGGCACCTTTCCTTGCTCTG
CAGAAAGAGAACTCCTTTTTAACCATGCTGTTACTTCTTTCCAAGTACAAAATGAAGAGCATCCCAGTGGTTGATCTAGGGGAAGC
AAAGATTGAGAACATAATCACACAGTCAGGAGTTATCCATATGCTAGCAGAATGCGCTGGGCTTCACTGGTTTGAAGATTGGGGAG
TCAAAACTCTATCTGAAGTCGGTCTTCCCACTATGTCAAAAGATCATATCATAAAGATTTATGAAGATGAACCAGTTCTTCAGGCG
TTCAAGCTGATGAGGAGAAAGAGAATCGGAGGCTTACCCGTTGTTGAAAGACAAACTGAGAAGCCAGTAGGCAACATTAGCCTTAG
AGATGTCCACTTTCTCCTCACTGCACCAGAGATCTACCATGACTACAGGTCAATCACAACGAAGAACTTCTTAGTAGCGGTTAGGG
AGCATCTGGAGAAGCATGGAGATACCTCAGCACCTATCTTGAGTGGTGTCATTGCTTGCACTAAGAACCATACGTTGAAGGAACTG
ATTTTGATGCTAGACGCTGAGAAGATCCATAGGATGTATGTGGTGGATGATTCAGGTAACCTGGAAGGACTCATCACTCTCAGAGA
CATCATAGCAAGACTTGTACATGAGCCACCTGGCTATTTTGGTGATTTCTTTGACGGTGTTATGCCTCTACCTCAGAACTACCGAG
TCTGAGAAATGCTTTCTTTCTTTCTTTGTGTAGACTTGTCTTTGGTTTCGTTATGCTTCTCTGTATGTTTGTGCGAAAGTTCATGA
ATTTGTGTTTAAACGTTCTAACAGAAAATAATAAATGAAGAAAGAGTCAAGTCTTTGAGCG
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GenBank top hits (Blast detail) | Score | e value |
XP_002875911 CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 2056 | 2e-228 |
NP_190422 SNF1-related protein kinase regulatory subunit gamma 1 [Arabidopsis thaliana] | 2054 | 3e-228 |
AAM64867 unknown [Arabidopsis thaliana] | 2046 | 3e-227 |
XP_002321699 predicted protein [Populus trichocarpa] | 1564 | 2e-171 |
XP_002511194 AMP-activated protein kinase, gamma regulatory subunit, putative [Ricinus communis] | 1544 | 4e-169 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q8LBB2 SNF1-related protein kinase regulatory subunit gamma 1 | 2054 | 1e-229 |
TrEMBL top hits (Blast detail) | Score | e value |
B9IFA2 Predicted protein | 1564 | 1e-171 |
B9RAG9 AMP-activated protein kinase, gamma regulatory subunit, putative | 1548 | 1e-169 |
B9I3Q6 Predicted protein | 1537 | 2e-168 |
A5AH78 Putative uncharacterized protein | 1046 | 2e-111 |
B7FIY7 Putative uncharacterized protein | 1035 | 3e-110 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G48530.1 KING1 (SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1) | 2055 | 8e-231 |
AT1G69800.1 CBS domain-containing protein | 539 | 5e-055 |
AT1G69800.2 CBS domain-containing protein | 539 | 5e-055 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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