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Information for unigene UN17654
| FASTA Sequence |
| Unigene ID: UN17654 | Length: 941 |
SSR | SNP | GGGAAGTTATTCGCGGCCGTGATTCCAAAACGCTGTCGTTCCAGAGTCTAGCGTTATCCACGTTTTATCGTCTTCAGTCGAACGGA
TAAGACGAAGAAGAAGAAGAAGAAACAAGTGTTAGCGCTCCACTTGGAGAGGCGAGAACAAAGTTGAAAAAATGGCGACCATGTCT
GCTCTTCAGAGCTCATTTACATCTCTTTCCATATCCTCCAACTCCTCCTTCCTCGGCCAGCGTCTCCTTTCCCCGATTCCCCTCTC
CGTCGCTTCTCCGGTCAAACTCGTTAAGAACCCATGTCTTGTCTTTGCAAAGCTAAAGCGTTGGGAACGGAAGAAATGCAAACCAA
ACAGTCTTCCCATTCTTCACAAGATGCATGTCAAGTTCGGAGATACGGTCAAAGTTATATCTGGACGCGACAAGGGTAAGATTGGA
GAAGTCACTAAGATCTTTACCCACAACAGCACCGTTGTCATCAAAGATGTCAACCTCAAGACCAAACACATGAAGAGCCGTGAAGA
GGGTGAGCCTGGCCAAATTGTCAAGATCGAAGCACCGATCCACAGCTCAAATGTGATGCTGTATTCGAAAGAAAAGGAGGTGGTAA
GCCGGGTGGGTCACAAGGTCCTTGAAGATGGACAGAAGGTAAGGTATCTGATCAAAACTGGGGAACTTATCGACACCATCGAGAAG
TGGAAGCAACTTAAGGAGGCTAAAGATAAAGAAAATACTCAAGTTGCAGTTGCCTCTTCATCTTAACGTCTCCACTTTTGATATAT
TTGTCTGATGAATGTATTAAGTTGCTTCCTTAAGTTATGCTTAGAATGGTACTTAAACTTGTGTTTTATTCTAAACATACATTTTT
TACAAAGTTTTTGCAAAGCTGTGGAACGTATGTTTATATCGACCAACATTTTACATTAAAAAAAAAACAATTCAAATGGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864348 50S ribosomal protein L24, chloroplast [Arabidopsis lyrata subsp. lyrata] | 941 | 2e-099 |
| NP_851190 50S ribosomal protein L24 [Arabidopsis thaliana] | 920 | 5e-097 |
| CAA70851 plastid ribosomal protein [Arabidopsis thaliana] | 916 | 1e-096 |
| XP_002522816 mitochondrial ribosomal protein L24, putative [Ricinus communis] | 713 | 5e-073 |
| ACU14925 unknown [Glycine max] | 691 | 2e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P92959 50S ribosomal protein L24, chloroplastic | 920 | 2e-098 |
| P11893 50S ribosomal protein L24, chloroplastic | 678 | 2e-070 |
| Q02764 50S ribosomal protein L24, chloroplastic | 647 | 9e-067 |
| P27683 50S ribosomal protein L24, chloroplastic | 631 | 7e-065 |
| B1XJS8 50S ribosomal protein L24 | 373 | 5e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S9Z7 Mitochondrial ribosomal protein L24, putative | 713 | 3e-073 |
| C6T0A2 Putative uncharacterized protein | 691 | 1e-070 |
| A9PCT1 Predicted protein | 690 | 1e-070 |
| B7FMZ9 Putative uncharacterized protein | 688 | 3e-070 |
| C6SZB2 Putative uncharacterized protein | 682 | 1e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G54600.1 50S ribosomal protein L24, chloroplast (CL24) | 921 | 1e-099 |
| AT5G54600.2 50S ribosomal protein L24, chloroplast (CL24) | 469 | 4e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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