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Information for unigene UN17682

FASTA Sequence
Unigene ID: UN17682Length: 793  SNP
GGACTACATACATATATAGAGATATCGAACTGTGATTACACAAGAATAATCTCTCCTTAGTCGCTATAGGGTAATCAGTTAAAAAG
ACCAATGAAGATACATCGTGCCATAATCCTGGTGACACTCTTGGCCTTGATCAAGACCGCGGTTTCCCAACTTCAGTCGATTGAGC
AGTGCAGAGAGGTGTTCGACAGTTTCATGCCGTGCATGGGCTTCGTCGAGGGAATCTTCCAGCAACCTTCTCCGCAATGCTGCAGA
GGCGTGACCCACTTGAACAACGTCGTCAAGTTCAAGACTCCAGGATCGAGGAAGAATGAGCAGGGGAGTGGAGAGCTAGAGAGAGT
ATGTGAATGCATTGAGATAATGGGAAAAGCAGATCATCTTCCTTTTCTGGCATCCGCCATCAACAATCTTCCACCCCTTTGTTCGC
TTAGTCTCAGCTTCCCTATATCTGTTGGAATGGACTGTTCTCAGTTCAGAAACATGAAGGAACTCGATGCTGAAAAGCTAAATTAG
TTACAAGTATGTATGAATAGTGGAAATGGAAGACTTGTAATAGCTATGCATGATATATAATCGAACTTATTGTATTAGTGACCAGT
GTGACAAAAAATAATACGAATTAGTCAAGAAAGAGCGGATAACACTTGATCAATAACTCTTCCATTGATATTTGACAGCATAAAAG
AATATGAATTAGTCAAGAAAGAGCACTTGATCGATAGCTCTTTCACTAATATTTGTATGTGTGTGGTTGTATATCAACGACGAAAA
AAACCTTTGATTGGTGGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAC39503 ATA7 [Arabidopsis thaliana]5281e-051
NP_567807 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana]5281e-051
XP_002869507 hypothetical protein ARALYDRAFT_328856 [Arabidopsis lyrata subsp. lyrata]5252e-051
ABS79079 At4g28395-like protein [Arabidopsis lyrata subsp. petraea]4931e-047
ABS79086 At4g28395-like protein [Arabidopsis lyrata subsp. petraea]4902e-047

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O49116 ATA75287e-052
B3SJF4 Non-specific lipid-transfer protein (Fragment)4938e-048
B3SJG1 Non-specific lipid-transfer protein (Fragment)4902e-047
B3SJF2 Non-specific lipid-transfer protein (Fragment)4883e-047
B3SJF1 Non-specific lipid-transfer protein (Fragment)4874e-047

Arabidopsis top hits (Blast detail)Scoree value
AT4G28395.1 ATA7; lipid transporter5293e-054
AT4G28397.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: ATA7; lipid transporter (TAIR:AT4G28395.1); Has 42 Blast hits to 42 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1262e-007
AT5G44265.1 lipid binding1144e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
68  22%
 
102  6%
 
811  31%
 
115  14%
 
123  8%
 
96  17%
 
71  3%

Unigene MembersMember information