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Information for unigene UN17710
| FASTA Sequence |
| Unigene ID: UN17710 | Length: 1673 |
SSR | SNP | CGAAAGTTCTAAGAAGTCAAGCAGTGTGAAGATAATTGTTCCTGTGGTTGGTGGTGTTGTTGGTGCATTGTGTCTTGTGGGACTCG
GTGTTTGCCTCTACGCCAAGAAGGGAATGAGACCCGCTAAAGTGCAGAGCCCAAACACCACCAACATGGTGATTCATCCTCATCAC
TCTGGTGACAGCGATGCGATTAAACTCACTGTTGCAGCTTCTAGTCTCAACAATGGGGGAGGAGGAGGAGGAACCGAGAGCTCTTA
CAGTCACAGCGGAAGCGCCAACAGTGACATACACGTCGTGGAGTCTGGTAACTTGGTGATATCCATACAGGTTCTGAGGAGTGTGA
CTAACAACTTCAGCGAAGAGAATATACTCGGGAGAGGCGGTTTCGGTGTAGTTTACAAAGGTGAACTCCATGATGGAACTAAAATA
GCTGTCAAGAGGATGGAGTCTTCTTCGGTTGTGAGTGATAAGGGACTCGCTGAGTTCAAATCAGAGATCACGGTTTTGACTAAAAT
GCGTCACCGTCATCTTGTTGCGCTTCTAGGGTACTGCCTTGATGGTAACGAGAGGCTTCTTGTCTATGAGTACATGCCGCAAGGAA
CACTGAGCCAGCATCTGTTCCACTGGAAAGAAGAAGAGCGTAAACCACTTGATTGGACTAGAAGGTTGGCTATCGCGTTGGATGTA
GCTAGGGGTGTGGAGTATTTACACACGCTTGCTCATCAGAGTTTCATCCATAGGGATCTAAAACCATCTAACATCCTTCTTGGTGA
TGATATGCGTGCTAAAGTCTCCGACTTTGGGTTAGTCCGCTTAGCCCCTGAAGGCAAATACTCCATCGAGACGAGAGTCGCTGGGA
CCTTCGGTTACCTTGCCCCTGAATATGCAGTGACTGGAAGAGTGACGACCAAGGTAGATATCTTCAGCCTCGGGGTCATATTAATG
GAGCTAATCACTGGTCGTAAAGCCTTAGATGAGACGCAACCTGAGGACAGCGTCCATCTAGTCACATGGTTCCGTCGTGTGGCAGC
AAGCAAAGACAAAGACGAGAACGCCTTCAAGAACGCAATAGACCCAAACATCAAGCTGGACGAAGACACCTTAGCCAGCGTTGAAA
AAGTTTGGGAGCTTGCTGGTCATTGCTGTGCACGTGAGCCTTACCAAAGACCTGACATGTCTCACATCGTTAACGTTCTTTCTTCG
CTCACTGTCCAGTGGAAACCCACTGAGGTCGATCCTGATGACCTTTACGGTATAGATTATGATCTTCCGCTTCCGCAGGCGGTTAA
GAAATGGCAAGCTTCTGAAGGGCTTAGCCAAACGGGAGATGACTCTGGTTCTTCGTCCTCTGTTTATGGAAGCAAAGATAACACAC
AGACAAGTATCCCAACACGCCCGTCTGGATTTGCTGACTCGTTCACATCTGTGGATGGACGTTGAAGAAAATAAAAGACTGCGTTT
CTCAGTTTCGTTAAAAACGTTTTTAGTAGTATAGAAGTAGTAGATGAAGAATCCTTGTGTGAAAAAAGTTCCTATTTTCTTGTTCT
TTGTTTTTGTCTGAAGCATTTACTTGTGACATCTATTTTTCATGAAAACTTTTGGTTTAAGTGTACTCTATCGTTGTAGTGTTTAT
GCAAACATAAAGTATCTATACTATACATCTTGCATCTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876780 hypothetical protein ARALYDRAFT_484098 [Arabidopsis lyrata subsp. lyrata] | 2237 | 2e-249 |
| NP_178291 leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] | 2235 | 3e-249 |
| XP_002281552 PREDICTED: hypothetical protein [Vitis vinifera] | 1739 | 1e-191 |
| XP_002527538 receptor protein kinase, putative [Ricinus communis] | 1681 | 6e-185 |
| XP_002265087 PREDICTED: hypothetical protein [Vitis vinifera] | 1679 | 1e-184 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P43298 Probable receptor protein kinase TMK1 | 1589 | 1e-175 |
| Q3EDL4 Probable serine/threonine-protein kinase At1g01540 | 606 | 1e-061 |
| Q9FID9 Probable receptor-like protein kinase At5g38990 | 585 | 3e-059 |
| Q9FID8 Putative receptor-like protein kinase At5g39000 | 574 | 6e-058 |
| Q9SJG2 Probable receptor-like protein kinase At2g42960 | 564 | 8e-057 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SIT1 Leucine-rich repeat receptor-like protein kinase | 2235 | 2e-249 |
| B9SNG9 Receptor protein kinase, putative | 1681 | 4e-185 |
| Q9M7A8 LRR receptor-like protein kinase | 1673 | 4e-184 |
| B9GUN8 Predicted protein | 1650 | 2e-181 |
| B9HVS4 Predicted protein | 1644 | 8e-181 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G01820.1 leucine-rich repeat protein kinase, putative | 2247 | 5e-253 |
| AT1G66150.1 TMK1 (TRANSMEMBRANE KINASE 1); transmembrane receptor protein serine/threonine kinase | 1595 | 2e-177 |
| AT1G24650.1 leucine-rich repeat family protein / protein kinase family protein | 1286 | 1e-141 |
| AT3G23750.1 leucine-rich repeat family protein / protein kinase family protein | 1233 | 2e-135 |
| AT1G70460.1 protein kinase, putative | 655 | 2e-068 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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