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Information for unigene UN17735

FASTA Sequence
Unigene ID: UN17735Length: 980 SSRSNP
GGAATCGTCTTCACCAAACCTTAGGATAACTTGAAACAAGAAAACGGCGTCGGTTAGACCGACGGAGGAGGAACCATGTCGTCGTC
TCTTCTTCTCTCTGGCTCTACAGTATCTTCTCCCCTCATCGCTCCATCAAAGCTCTCATCAAAGCTTTCTCTCTTACGGAATCAAA
ATCAATCACTGTCACTACCTCGGAGAACCTTCAAAGCCCCTAGGTGCTCCTCCTCCTCCTCCGCTGATTCTCCCTACGGAGGCAAC
GTCCCACGTTCCCTCGGACCAGAGTCTGGGACCCGTACAAGCGCCTAGGGATCAGCCCCTACGCTTCCGAGGAAGAGATCTGGGCC
TCTCGCAACTTCCTCTTGGAGCAGTACGCCGACCACGAGAGGAGCCGGGAGTCTATAGAGGGCGCCTTCGAGAAGCTTCTCATGTC
TAGTTTCGTGGCGAGGAAGAAGACTAAGATCAACCTCAAGACGAGGTTGAAGAAGAGAGTCGAGGAGTCTCCTCCGTGGCTCAAGG
CTCTTTTTGATTTCGTTGAGATGCCTCCGATGGATACTGTGTTCAGAAGGCTGTTCCTTTTTGCCTTCATGGGTGGTTGGAGTATC
ATGAACTCAGCTGAAGGCGGTCCTGCCTTTCAGGTGGCGGTGTCTTTGGCTGCTTGCGTATATTTCCTGAATGAGAAGACAAAGAG
CTTGGGGAGAGCTTTCTTAATCGGGTTTGGTGCATTAGCGGCTGGATGGTTCTGCGGTTCGCTAGTCATTCCCATGATTCCGACTG
TTTTGATTAACCCGGCATGGACACTGGAGCTCCTAACGTCACTGGTTGCTTATGTGTTTTTGTTTCTTTCTTGTACTTTCCTCAAG
TAGAGTTGCTTTTTTTGTTTCTTTCTTGTACCTGATCTCGCCGGAAAATTGAACTTAAGTTCCATAACATTGGCTGGCTCTGTTAA
AGTGTGGAATCAAGTTGATGAGAATCTTTTGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874108 hypothetical protein ARALYDRAFT_489157 [Arabidopsis lyrata subsp. lyrata]9789e-104
NP_197695 uncharacterized protein [Arabidopsis thaliana]9716e-103
XP_002512008 conserved hypothetical protein [Ricinus communis]8991e-094
XP_002318556 predicted protein [Populus trichocarpa]8901e-093
CAN64440 hypothetical protein VITISV_017550 [Vitis vinifera]8434e-088

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FN50 AT5g23040/MYJ24_39714e-103
B9RE69 Putative uncharacterized protein8999e-095
B9I2N2 Predicted protein8901e-093
A5AD93 Putative uncharacterized protein8433e-088
C6T7R0 Putative uncharacterized protein8147e-085

Arabidopsis top hits (Blast detail)Scoree value
AT5G23040.1 CDF1 (CELL GROWTH DEFECT FACTOR 1)9722e-105
AT3G51140.1 INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: CDF1 (CELL GROWTH DEFECT FACTOR 1) (TAIR:AT5G23040.1); Has 133 Blast hits to 133 proteins in 42 species: Archae - 0; Bacteria - 60; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).3252e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  10%
 
112  20%
 
81  10%
 
191  10%
 
93  30%
 
72  20%

Unigene MembersMember information