 |
Information for unigene UN17746
| FASTA Sequence |
| Unigene ID: UN17746 | Length: 1478 |
SSR | SNP | GAAAAAACAAAATAGTTTGATATATTATTACAAAAGTTTTATTGGCAACAGAACCAAGCAAATACATTGTTGGCAAAGACGAACAA
ACGAATAGGGGAGAGACTCTACTTATTGTGTAAATTTAGTACACGCACTCACTCACACACGTAGAGCGACATAAACAGTCAGTGCA
ACAAAACCGCAGATTATACAGCAGAAAACAAGAAGTCTGGAGTAACAGAAATAAAACCAACAACCACTACACTTGGTTCTTTCACA
TCTTTTACCAGACCACCTCAGAACATGTAGACAACACTGTCGTGGATCCTTGACTTCTGGTTCTGTGCAACACACTCCGATATCCA
CATCAGGTTCCTGATCTCCTGCTCTCTCAACCTCATATACGCAAAGAACACCCCGTAATGGAACTGCTGCTCAAAGGCTAAGCAAA
GCCTTCTGACTTCTTCTTCATAAAACGCCTTGTCGAGCATTTGGCTCTCTCCGTAAGACATCTTGGAGAATATTGCTTGGTAAGGA
GGGTATTTCTCCATAACACCACGAACCTGATCTATGTCTTCGCAGATAGCAAGCTCCTCGTGACCATATGGATAGAGGAGACCAAA
GTTAGAGTACAGTTTCTTCCTGTCTTCTCTTGTAAGCTCAGTGCCAATGCTGTTGATGGTGATGTTCACAGCTCTTCTGTCAGCTT
CGAAGGCAAGAAGGTCAGACATTATCTCTGCTGTTGCCCCACCAAGTTTCTGACAGAACTTGTAAAAATCCTCAAGGTATGCTTTG
TAGAGCGTGTTCCTCATAATCTCAATGTTCATGTCATCCAAATCCTCTGAGGTTAAGCATTCAGAGAAATATGGAGCCAGAGGAGT
ATCCACAAGTACCAACCTATAGAGCTCCCTCATGTTCTGAGCAACTGCCAGCGTGGCAATGCTATCAAACATGCCTAAAGGGTGAC
ATTTCTCGATCAGCTCTTGAACATCTCTCTCGTGGAGCGTTCCAGTAACAATCAGCACGACGTTGTCAATCATGTGGCCGTATCTG
ATGTACTCCAAGAAGGTAGACATAGGCTCAGTTGCTTGACAAAGCATATGCTTATAATCATCAACAAGCTTGAGAGTGCACTTCTC
CACAATTGTGGTCGTATGCAGTGGTGACGGTTCGTTTTGGAGGTAAGGGCCGTACTTGGTGGCGGAGAGGTGCATCTTGATGTCGT
CAAGGTTTTCACACTGGCACAGATTGTTGTAATCGGCGGTGGTGAGAAGACCAGCACGGTGGCCCCTCACGATCGCCTCCAAGTAT
CCGCCGTGGATGTTGAACGTAAGCGCCTCGAATCCGTACATCCTTCTTCCCTTTCCTTTCGCTTCCGGGGGATATTCAGATCTTGA
CGGGAGAGAGAGAGATCTGAAGAAAAACAATTCGAAGCTGAGAGAGGCAGAGAGAGAGATCGATCGCTAAAGAAGATACCTTTGAA
AATTGATTTGTTTTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189513 V-type proton ATPase subunit d2 [Arabidopsis thaliana] | 1841 | 1e-203 |
| NP_189512 V-type proton ATPase subunit d1 [Arabidopsis thaliana] | 1838 | 3e-203 |
| AAG40030 AT3g28710 [Arabidopsis thaliana] | 1834 | 9e-203 |
| XP_002282568 PREDICTED: hypothetical protein [Vitis vinifera] | 1771 | 2e-195 |
| ACJ05375 vacuolar ATPase subunit d [Vigna radiata] | 1771 | 2e-195 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LHA4 V-type proton ATPase subunit d2 | 1841 | 6e-205 |
| Q9LJI5 V-type proton ATPase subunit d1 | 1838 | 1e-204 |
| Q8RU33 Probable V-type proton ATPase subunit d | 1722 | 4e-191 |
| P54641 V-type proton ATPase subunit d | 1121 | 2e-121 |
| Q9W4P5 V-type proton ATPase subunit d 1 | 1005 | 5e-108 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FE04 AT3g28710 | 1834 | 6e-203 |
| A5ACR7 Putative uncharacterized protein | 1771 | 1e-195 |
| B6VAX6 Vacuolar ATPase subunit d | 1771 | 1e-195 |
| A2Q5T7 H+-transporting two-sector ATPase, C (AC39) subunit | 1770 | 2e-195 |
| B7FIK1 Putative uncharacterized protein | 1760 | 2e-194 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G28715.1 H+-transporting two-sector ATPase, putative | 1842 | 4e-206 |
| AT3G28710.1 H+-transporting two-sector ATPase, putative | 1839 | 9e-206 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
