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Information for unigene UN17855

FASTA Sequence
Unigene ID: UN17855Length: 1190  SNP
GGACGATTAGAATTTGCCGTAGTACGAAACAAAGAGAATAAGCGTAGTAAAAGGCATTGATTGTTTGAATGGAACAACCGAGTTAC
GATATCTCTCAAGAAGAAGCACGTGAGTCTCTCATTGCCATCTCCTACACTTCACCGGAGGAGGTTGAAGAGTCTCTTCTAACGTC
CTCAGATGTGAAACCTATCGCCGCCACTACAACAAACGGAGTCGTCACTAAAAGAAACTCTGAAGATGCTGAAAAGCTCAGATCAG
AGCTGATTTCCATCTCCTACGACGAGTCACTCTCATCACCCTCACCACCTGTAGCTGTCTGATAGGACTAATTGTACAGATCCAAA
GTCTTTTCCTTTCATGCATTCGACTTTGGTTTTGTTTGAAAGTTAAGACACTCTTCAACTATATGATTGAAAAATTGACGAAAGTT
TCTCGCTGTGTGTTACTTTTAGTTAAAGCTCTCTTGAGACTCATCGAATGATCTTTAACCAAAACAGTATAGAAATACAAATCTGA
TAAAAAAAGATAGGAAACATTGACAAGTAGCGAAAAGATTGAAACTGTAGCATGGGTTCTCTTGTTTTGCTTAGGACATACTGGCA
AAGACAAAGAAACCCTAGTGAGCAGCGTCTTCCTCTTCGCAGAACTTGGTGTATTCCGTTGGACCCATCAAGGATTCCAACTCTGC
GGGGTTGCTTGGTTTCACCTTTATCATCCAACCATCTTCGTAAGGGCTCGAGTTAATCAAGCCAGGTGAATCAGCGAGCTTTGTGT
TAACCTCGATGACTTCACCAGAGATTGGAGATATAATCTCACTCGTTGCCTTAACACTCTCCACTGCTCCAAAGTTTTTCTCTTTG
GTCACTGAACTTTTTTCTTCAGGCAGCTCCACAAACACAACTTCTCCTAAATGATCCTGGGCATGGTCACTGATGCCAATAGTAGC
CACTGAGCCTTCATGTTTCACCCACTCATGTGAATTTGCATACTTAAGTCCTTCCAATACTGAGGAGAAGCATCTGGAGATGGAGA
ACGCTGGAAGGAGATGAGATTTGGATGCAGAAGATGACAGCTTGAGAGCGTTTGCTGTTGAGGAAGCCCACATTCTCAGTGCCATT
TTTTCTGTTTTCTTTCTCTCTTTTTTTTCTTGGTTCTGTTTTCTTTCTCAAAGGGAAGTGGGAAAATGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174525 glycine cleavage system H protein [Arabidopsis thaliana]8005e-083
XP_002893726 hypothetical protein ARALYDRAFT_890824 [Arabidopsis lyrata subsp. lyrata]7908e-082
NP_181080 glycine cleavage system H protein 1 [Arabidopsis thaliana]7503e-077
XP_002879548 predicted protein [Arabidopsis lyrata subsp. lyrata]7324e-075
CAN76620 hypothetical protein VITISV_038357 [Vitis vinifera]7154e-073

Swiss-Prot top hits (Blast detail)Scoree value
Q9LQL0 Probable glycine cleavage system H protein 2, mitochondrial8002e-084
P25855 Glycine cleavage system H protein 1, mitochondrial7501e-078
P16048 Glycine cleavage system H protein, mitochondrial6936e-072
Q39732 Glycine cleavage system H protein, mitochondrial6685e-069
P49359 Glycine cleavage system H protein, mitochondrial6613e-068

TrEMBL top hits (Blast detail)Scoree value
Q0WR60 Glycine decarboxylase complex H-protein7502e-077
A5BA00 Putative uncharacterized protein7153e-073
B7FM93 Putative uncharacterized protein7101e-072
C6T0B7 Putative uncharacterized protein7072e-072
Q4LAP1 Glycine decarboxylase multi-enzyme complex, H subunit6931e-070

Arabidopsis top hits (Blast detail)Scoree value
AT1G32470.1 glycine cleavage system H protein, mitochondrial, putative8012e-085
AT2G35370.1 GDCH; glycine dehydrogenase (decarboxylating)7563e-080
AT2G35120.1 glycine cleavage system H protein, mitochondrial, putative4606e-046
AT1G32460.1 unknown protein1991e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  5%
 
116  15%
 
83  8%
 
917  44%
 
67  18%
 
122  5%
 
191  3%
 
71  3%

Unigene MembersMember information