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Information for unigene UN17855
FASTA Sequence |
Unigene ID: UN17855 | Length: 1190 |
| SNP | GGACGATTAGAATTTGCCGTAGTACGAAACAAAGAGAATAAGCGTAGTAAAAGGCATTGATTGTTTGAATGGAACAACCGAGTTAC
GATATCTCTCAAGAAGAAGCACGTGAGTCTCTCATTGCCATCTCCTACACTTCACCGGAGGAGGTTGAAGAGTCTCTTCTAACGTC
CTCAGATGTGAAACCTATCGCCGCCACTACAACAAACGGAGTCGTCACTAAAAGAAACTCTGAAGATGCTGAAAAGCTCAGATCAG
AGCTGATTTCCATCTCCTACGACGAGTCACTCTCATCACCCTCACCACCTGTAGCTGTCTGATAGGACTAATTGTACAGATCCAAA
GTCTTTTCCTTTCATGCATTCGACTTTGGTTTTGTTTGAAAGTTAAGACACTCTTCAACTATATGATTGAAAAATTGACGAAAGTT
TCTCGCTGTGTGTTACTTTTAGTTAAAGCTCTCTTGAGACTCATCGAATGATCTTTAACCAAAACAGTATAGAAATACAAATCTGA
TAAAAAAAGATAGGAAACATTGACAAGTAGCGAAAAGATTGAAACTGTAGCATGGGTTCTCTTGTTTTGCTTAGGACATACTGGCA
AAGACAAAGAAACCCTAGTGAGCAGCGTCTTCCTCTTCGCAGAACTTGGTGTATTCCGTTGGACCCATCAAGGATTCCAACTCTGC
GGGGTTGCTTGGTTTCACCTTTATCATCCAACCATCTTCGTAAGGGCTCGAGTTAATCAAGCCAGGTGAATCAGCGAGCTTTGTGT
TAACCTCGATGACTTCACCAGAGATTGGAGATATAATCTCACTCGTTGCCTTAACACTCTCCACTGCTCCAAAGTTTTTCTCTTTG
GTCACTGAACTTTTTTCTTCAGGCAGCTCCACAAACACAACTTCTCCTAAATGATCCTGGGCATGGTCACTGATGCCAATAGTAGC
CACTGAGCCTTCATGTTTCACCCACTCATGTGAATTTGCATACTTAAGTCCTTCCAATACTGAGGAGAAGCATCTGGAGATGGAGA
ACGCTGGAAGGAGATGAGATTTGGATGCAGAAGATGACAGCTTGAGAGCGTTTGCTGTTGAGGAAGCCCACATTCTCAGTGCCATT
TTTTCTGTTTTCTTTCTCTCTTTTTTTTCTTGGTTCTGTTTTCTTTCTCAAAGGGAAGTGGGAAAATGGTCC
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GenBank top hits (Blast detail) | Score | e value |
NP_174525 glycine cleavage system H protein [Arabidopsis thaliana] | 800 | 5e-083 |
XP_002893726 hypothetical protein ARALYDRAFT_890824 [Arabidopsis lyrata subsp. lyrata] | 790 | 8e-082 |
NP_181080 glycine cleavage system H protein 1 [Arabidopsis thaliana] | 750 | 3e-077 |
XP_002879548 predicted protein [Arabidopsis lyrata subsp. lyrata] | 732 | 4e-075 |
CAN76620 hypothetical protein VITISV_038357 [Vitis vinifera] | 715 | 4e-073 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9LQL0 Probable glycine cleavage system H protein 2, mitochondrial | 800 | 2e-084 |
P25855 Glycine cleavage system H protein 1, mitochondrial | 750 | 1e-078 |
P16048 Glycine cleavage system H protein, mitochondrial | 693 | 6e-072 |
Q39732 Glycine cleavage system H protein, mitochondrial | 668 | 5e-069 |
P49359 Glycine cleavage system H protein, mitochondrial | 661 | 3e-068 |
TrEMBL top hits (Blast detail) | Score | e value |
Q0WR60 Glycine decarboxylase complex H-protein | 750 | 2e-077 |
A5BA00 Putative uncharacterized protein | 715 | 3e-073 |
B7FM93 Putative uncharacterized protein | 710 | 1e-072 |
C6T0B7 Putative uncharacterized protein | 707 | 2e-072 |
Q4LAP1 Glycine decarboxylase multi-enzyme complex, H subunit | 693 | 1e-070 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G32470.1 glycine cleavage system H protein, mitochondrial, putative | 801 | 2e-085 |
AT2G35370.1 GDCH; glycine dehydrogenase (decarboxylating) | 756 | 3e-080 |
AT2G35120.1 glycine cleavage system H protein, mitochondrial, putative | 460 | 6e-046 |
AT1G32460.1 unknown protein | 199 | 1e-015 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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