Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN18108

FASTA Sequence
Unigene ID: UN18108Length: 1045  SNP
CACCTAATATGAAAAAGAATGCATTTTCATTTAGATCACAATCTTTGAACGTTAGCAAAAAAATGTGTTACCTACCACCAGTCTCT
TGCTTGCTATATAGATATTCCACATTAAACGTTATATGAATCATTTCTGCAAGATCATAAAAACTGAATATCAAACTAGCTGCTTG
TAAACATCTACACTCTCAACCTCAAGCACACAAAATAAAAAAAGAAATGGGAACAGAGATGGTAATGGTTCACGAGGTTCCTTTTC
CTCCACAGATCATCACTTCCAAGCCCCTCTCTCTTCTTGGACAAGGCATCACTGACATCGAGATCCATTTTCTCCAAGTGAAGTTC
ACGGCCATAGGAGTTTACTTAGATCCATCAGATGTTAAAACCCATCTTGACAAATGGAAAGGCAAGACCGGAAAGGATCTCGCCGG
CGATGACGACTTCTTCGACGCCCTGGCCTCCGGGGAGATTGAGAAAGTTATAAGAGTGGTGGTGATAAAAGAAATAAAAGGAGCTC
AGTACGGAGTGCAGCTAGAGAATGCGGTGAGAGATCGTTTGGCTGCTGAGGATAAGTACGAGGAGGAAGAAGAAACCGAGCTCGAG
AAAGTTGTTGGATTTTTTCAGTCTAAGTACTTCAAGACTCATTCTATCATTACTTACCGTTTCTCAGCCAAAGATGGCATTTGCGA
GATCGGATTTGAGACGGAAGGTAAAGAAGAGGAGAAATTGAAAGTAGTGAATGCTAATGTGGTGGGGATGATGCAGAAGTGGTACT
TGTCTGGAAGTAGAGGAGTTTCACCGTCCACCATCGTCTCCCTCGCCGATTCTCTGTCCGCAGTTTTAACCTAAAACTACTTATAT
AAGCACCTATCATCTTGTTGCCCCAAAAAAAAGCACCTAGCATCTATGTGTGTTTTATGTTGTTGTATTATGCCGTTCTTAAGCGA
GACATCGTGTTAATTGGTTATCTTTATAAAATGTTTAATGGCTGTCTTTATAAAATTCACAGAGCAACGTTGTTTAAATTATAAAC
ATATACCAAACTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568154 chalcone-flavanone isomerase-like proetin [Arabidopsis thaliana]10041e-106
XP_002871147 chalcone-flavanone isomerase family protein [Arabidopsis lyrata subsp. lyrata]9951e-105
BAB09970 unnamed protein product [Arabidopsis thaliana]9833e-104
ADG27840 chalcone isomerase [Gossypium hirsutum]7476e-077
CBI25366 unnamed protein product [Vitis vinifera]7342e-075

Swiss-Prot top hits (Blast detail)Scoree value
Q3Y4F4 Chalcone--flavonone isomerase2411e-019
Q2PF16 Chalcone--flavonone isomerase2293e-018
Q45QI7 Chalcone--flavonone isomerase2259e-018
Q9ZWR1 Chalcone--flavonone isomerase2213e-017
A2IBF8 Chalcone--flavonone isomerase2204e-017

TrEMBL top hits (Blast detail)Scoree value
Q8VZW3 Contains similarity to chalcone-flavonone isomerase (Chalcone isomerase)10047e-107
Q9FLC7 Similarity to chalcone-flavonone isomerase9832e-104
D6N3G6 Chalcone isomerase7502e-077
A9PI95 Chalcone isomerase-like protein7116e-073
A5BMU2 Putative uncharacterized protein7081e-072

Arabidopsis top hits (Blast detail)Scoree value
AT5G05270.1 chalcone-flavanone isomerase family protein10053e-109
AT5G05270.2 chalcone-flavanone isomerase family protein10053e-109
AT3G55120.1 TT5 (TRANSPARENT TESTA 5); chalcone isomerase2015e-016
AT5G66220.1 chalcone isomerase1755e-013
AT1G53520.1 chalcone-flavanone isomerase-related1495e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
89  14%
 
94  6%
 
710  16%
 
103  5%
 
66  9%
 
1113  20%
 
1218  28%
 
181  2%

Unigene MembersMember information