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Information for unigene UN18419
| FASTA Sequence |
| Unigene ID: UN18419 | Length: 1253 |
| SNP | AATGAAATAAAGCATATATTGCAAAAAAAAACAAATAATGAAATACACTAGGGTATATGATATCTTAGTATCACGTAAATATAACA
CATTCGATGTCTTAGGGTTTATATACCATATAGACAATACAATAATGCACAAAAACAAAAGTTGTCCAAAAACGGAAATATATAGA
TGCAACCTAATAAAATATACATATTTATATATGTATTATATAAGATGATACATAACAAAAAAGGGTTAAATTTAAAAATGTAGTTC
ATCAAAATATTATTTTATACGCAAACTCTCTGCTCGGAACGGTAACTCGAGCCGGTTTGGTTTTTCTCTGTTTGAGATATCCAACC
GGATCTAACCGGTCTTTGTTGCCTTTTTGGGGCAATCACTCAGCTTCTGTTCTTGCATTTTTCTAAAGCCCTTGGAGCAAGTCCTT
TTGCTTCTGACCCCTTCATAATTCTTATGCGTTTGCATGAATCAACAAACATCTCCCATGGTACATCTCCTACAAGCATCCAGTCT
CCATCTTTATCTTCATAAGTTGGAACGTAATCTGATCCGTTCAAAAGATCGATTAATTTACTCTCATTCATAAAATCTTTCATTCC
CTGTGGTCCATAATTGCCTATGGTAAAAGAGCTGAACATTTTGCTTAAGGCGTCGGAGAGATCTTGGTAAGTTTTGTAGAGTTTCA
AATCAATTTTTCTTAGGTACGGTGCACCGTCCATGCTAACCTTCACGTAAGCTGCGGTAGCACAAGCGGAGGCAGAGGAGGTAACT
CCGCTGCTTCCGGAAGTCTTTTCCTCTGCTTGGATGGTATCTCCGGTGGTTGGCTTTTGGCATGACATCACGTTCTTCCGGAAAGA
TCGTACCGGCGGCCATCCCACAACTTGTGCCTTGGCCGGTGGTTTTAAGACCTTCTCCTTCATATTCTCTAAATCAACTTCGGAAA
CTGAATCCACAGCCGTCGATGAAAGGTTCAACTTGAGATCAACAGTCTCAGAAAATCCTCTTTTCCCATTATTCTTCACAGTCATG
GCTCCTCCGTGATTCTCACCCGGCAGCCCTAACCTCAGCTCCGTTGCCTCAAAGTTAATCATCTTACTTAATAAGGATTAGCAACA
CGTACTATATTAGGTAACCAGAAAACGAATTGGAGACTAAAGATTGTTCTGCTTCTAGGGTTTTAGTTCTTTTTGGAACTAAAACG
TTTGAAGGGAGAGAGAAGATTATGAAATGTGTTGAAACTACGAGGGGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187124 auxin-responsive protein IAA16 [Arabidopsis thaliana] | 1132 | 2e-121 |
| XP_002884465 indoleacetic acid-induced protein 16 [Arabidopsis lyrata subsp. lyrata] | 1102 | 6e-118 |
| ABV89663 indoleacetic acid-induced protein 16 [Brassica rapa] | 1049 | 8e-112 |
| BAJ34138 unnamed protein product [Thellungiella halophila] | 1045 | 2e-111 |
| XP_002531288 Auxin-responsive protein IAA16, putative [Ricinus communis] | 840 | 1e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O24407 Auxin-responsive protein IAA16 | 1132 | 8e-123 |
| Q38825 Auxin-responsive protein IAA7 | 759 | 1e-079 |
| P13089 Auxin-induced protein AUX28 | 576 | 2e-058 |
| Q9ZSY8 Auxin-responsive protein IAA27 | 536 | 1e-053 |
| Q38832 Auxin-responsive protein IAA14 | 535 | 1e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WNJ2 Auxin-induced protein | 1132 | 1e-121 |
| A8IXW6 Indoleacetic acid-induced protein 16 | 1049 | 5e-112 |
| B9SZ69 Auxin-responsive protein IAA16, putative | 840 | 9e-088 |
| B9I5F9 Predicted protein | 817 | 4e-085 |
| C8CBW3 Auxin/indole-3-acetic acid 3 | 814 | 1e-084 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G04730.1 IAA16; transcription factor | 1133 | 5e-124 |
| AT3G23050.1 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor | 760 | 1e-080 |
| AT3G23050.2 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor | 622 | 1e-064 |
| AT4G29080.1 PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor | 537 | 7e-055 |
| AT4G14550.1 IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor | 536 | 9e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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