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Information for unigene UN18504
| FASTA Sequence |
| Unigene ID: UN18504 | Length: 2002 |
| SNP | GGGAATTAGCATTCGAAGCAGTCAGCGGAATCGCTATCAATGGATGCTACGACGGCGGCGGCTCCATTCTCGTCCTTTACCACTTC
AAGACAAAACCTTTCTTCTTCCCCTTGTTCGTCGCTCCTTTCCCGGAAGAAACTCGGTAGTACTAATCTCAAATTCAAATCTCCGA
GAAGCCTCTCTGTTCGCGCATCTCCAACCTCCGATTCTGTTGTGACTTTGCTTGACTACGGAGCTGGGAATGTCCGTAGTATCCGT
AACGCTCTTCGTCACCTCGGTTTCAGCATCAAAGACGTGAAAACACCAGGTGACATTCTGAATGCTGATCGCCTCATCTTTCCCGG
CGTTGGAGCTTTTGCACCCGCCATGGATGTACTTAACAAAACCGGGATGGGAGAAGCTTTGTGCACATATATTGAGAACGACCGTC
CTTTCCTAGGCATATGTCTTGGCTTACAACTACTTTTCGACTCTAGTGAGGAGAATGGACCAGTCAAAGGTCTTGGTGTTATACCC
GGAACGGTTGGACGCTTTGATTCTTCAGCTGGTATAAGAGTACCCCACATTGGCTGGAATGCTTTGCAAGTCGGGAACGATTCTGA
AATTTTGGATGATGTTGGAAACCGTCATGTGTATTTTGTCCATTCTTACAGGGCCATTCCGTCAAGTGAAAACAAGGATTGGATTT
CGTCTACCTGCCATTATGGCGAATCCTTTATCTCTTCCATAAGAAGAGGAAATGTGCATGCAGTCCAGTTCCATCCAGAGAAGAGC
GGGGAGGTGGGGCTTTCTGTTTTAAGAAGGTTCTTGGATCCAAAATCACCCTCGAAACAGAAACCAATGGAAGGGAAGGCTTCAAA
GCTTGCAAAGAGGGTGATTGCTTGTCTTGACGTGAGGACTAATGATAAAGGAGATCTTGTAGTAACTAAAGGCGACCAATATGATG
TGAGAGAGCAATCTAACGAAAACGAGGTTCGTAATCTTGGAAAACCTGTGGATTTAGCTGGTCAGTATTACAAAGATGGTGCAGAT
GAGATTAGCTTTTTAAACATAACTGGATTCCGTGATTTTCCTCTAGGGGATTTGCCTATGATACGGGTTTTGAGGTACACATCAGA
GAATGTCTTTGTACCACTAACCGTTGGAGGTGGTATTAGAGATTTTACAGATGCTACCGGCAGATACTATTCGAGTCTGGAAGTTG
CTGCTGAGTATTTCAGATCCGGTGCTGATAAGATCTCCATAGGAAGCGACGCTGTTTATGCTGCGGAAGAGTTTATTAAATCAGGG
GTGAAGACAGGAAAGAGTAGTTTAGAACAAATATCCAGAGTTTATGGAAATCAGGCAGTGGTTGTAAGTATCGATCCTCGTAGAGT
TTATGTGAACCATCCTGAGGATGTGCCATACAAAGTCATCAGAGTAACTAACCCAGGTCCGAATGGGGAAGAATATGCATGGTACC
AGTGCACGGTAAGTGGAGGACGAGAAGGTCGGCCTATTGGAGCATATGAGCTTGCAAAAGCGGTGGAAGAGTTAGGTGCTGGTGAA
ATTCTACTGAACTGCATAGACTGTGATGGTCAAGGGAAAGGATTTGACACAGACTTGGTAAAGCTCATCTCTGATTTAGTGGGCAT
ACCGGTTATCGCAAGCAGTGGAGCAGGCACTCCTGAGCACTTTTCTGAGGTGTTTGAGACGACAAATGCTTCTGCTGCGCTTGCTG
CCGGAATTTTCCACCGGAAAGAGGTACCCATCCAATCTGTGAAAGAGCACTTGCTAGAGAAGAGCATAGAAGTCAGGATGTAAGAA
ATTCCTGGTTTTCCGTTTCTGTTCACGTGTTACCATTATTCGTGTCACACTTCCAACAAGATCGATTCTTATTTCAATAAGTTATT
ATTATAACAGATTAATCGATCACTGACCATTTCGTTGTATGAGAGTAGATGAACTTATGTTTTAATCTTTTTCATTGACCAACCAT
AAGAAAGCATATACATTTTCAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_194420 cyclase [Arabidopsis thaliana] | 2767 | 9e-311 |
| XP_002869588 AT-HF [Arabidopsis lyrata subsp. lyrata] | 2767 | 9e-311 |
| BAC43102 putative glutamine amidotransferase/cyclase [Arabidopsis thaliana] | 2753 | 4e-309 |
| BAA28783 glutamine amidotransferase/cyclase [Arabidopsis thaliana] | 2636 | 1e-295 |
| XP_002279105 PREDICTED: hypothetical protein [Vitis vinifera] | 2486 | 3e-278 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZ30 Imidazole glycerol phosphate synthase hisHF, chloroplastic | 2767 | 4e-312 |
| Q9P4P9 Imidazole glycerol phosphate synthase hisHF | 1112 | 3e-120 |
| O94303 Imidazole glycerol phosphate synthase hisHF | 1108 | 9e-120 |
| P33734 Imidazole glycerol phosphate synthase hisHF | 1017 | 3e-109 |
| Q92E86 Imidazole glycerol phosphate synthase subunit hisH | 422 | 3e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GX14 At4g26900 | 2753 | 3e-309 |
| B9SVA2 Imidazole glycerol phosphate synthase subunit hisf, putative | 2471 | 1e-276 |
| B9GFE9 Predicted protein | 2403 | 1e-268 |
| B9HNP1 Predicted protein | 2384 | 2e-266 |
| B9DHU6 AT4G26900 protein (Fragment) | 2265 | 1e-252 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G26900.1 AT-HF (HIS HF); imidazoleglycerol-phosphate synthase | 2768 | 2e-313 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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