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Information for unigene UN18588
| FASTA Sequence |
| Unigene ID: UN18588 | Length: 573 |
SSR | | GGCACTCCAAAAACGATCGATCTATCTGAATCTTCTCATTTTCCCCCTTTTCTCCGTTTCATAGCTAGCTAGGGTTTTCGAGATGG
GTCAGATCCAGTACTCTGACAAATACTTCGACGATACTTTCGAGTACAGGCACGTCGTACTTCCTCCTGAAGTCGCCAAGCTTCTT
CCCAAGAATCGTCTTCTCTCCGAAAATGAGTGGCGTGCGATTGGGGTGCAGCAGAGCCGTGGATGGGTCCATTACGCCATTCATCG
TCCAGAGCCACACATCATGTTGTTCAGGAGGACTCTCAATTACCAGCAGCAGCAGCAGCAGGAGAACCAAGCTCAAAACCTGCTCG
CTAAGTGAATCTGAGTTGTGCTGCGCTACAAACATTGGTTCTTGTTAGCTATTATGTTTCTTGTAAACATGGGTTTGTGAACCACA
ACCTCTAATAACTTTGTGTTCATGTTATCTATCCTTGGTTGGAGAAAAACATGCGAGTGAATGAGTGATAATCTGACTACTTTGAT
GTTATGCATTGTCTTTGTTCATCATGGATTATATCTTTTTCTTTCTGCCTCTTTGTT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002879125 cdk-subunit 1 [Arabidopsis lyrata subsp. lyrata] | 433 | 5e-041 |
| NP_180363 cyclin-dependent kinases regulatory subunit 1 [Arabidopsis thaliana] | 432 | 6e-041 |
| BAF36296 hypothetical protein [Ipomoea trifida] | 425 | 4e-040 |
| AAS79576 putative CDK regulatory subunit [Ipomoea trifida] | 420 | 2e-039 |
| XP_002523737 Cyclin-dependent kinases regulatory subunit, putative [Ricinus communis] | 419 | 2e-039 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23249 Cyclin-dependent kinases regulatory subunit 1 | 432 | 3e-042 |
| A2XCH8 Cyclin-dependent kinases regulatory subunit 1 | 404 | 6e-039 |
| Q6PS57 Cyclin-dependent kinases regulatory subunit 1 | 404 | 6e-039 |
| Q9SJJ5 Cyclin-dependent kinases regulatory subunit 2 | 404 | 6e-039 |
| P55933 Probable cyclin-dependent kinases regulatory subunit | 314 | 2e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| A0A8Z1 Putative uncharacterized protein | 425 | 3e-040 |
| Q6JJ57 Putative CDK regulatory subunit | 420 | 1e-039 |
| B9SCL8 Cyclin-dependent kinases regulatory subunit, putative | 419 | 1e-039 |
| Q6T300 Cyclin-dependent kinases regulatory subunit | 418 | 2e-039 |
| A9NIV3 Cyclin-dependent kinases regulatory subunit | 416 | 3e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G27960.1 CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1); cyclin-dependent protein kinase/ protein binding | 438 | 7e-044 |
| AT2G27970.1 CKS2 (CDK-subunit 2); cyclin-dependent protein kinase/ cyclin-dependent protein kinase regulator | 404 | 6e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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