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Information for unigene UN18654
| FASTA Sequence |
| Unigene ID: UN18654 | Length: 920 |
| SNP | GAATATAAATTGAATCAAAATTGAGATCGCAATGGTCACTAATCTCTTATACAAGATAAGAAATCATTCAGCGACACCAAAGATTT
TAGCTGGCCATTTCAATCTTTAAAGCAAACGAACAAAGTTTTAAACAGAGAGATGTGTATGGGTCCTAGTCTTACAATAAAGTTAC
AAAGCAGTTCTTGTTTCGACTGCAATGTTGATTTTGTTGATGAATTCATCAACAGGAATGGTTCCGAGCTCTCCTCCAAACCTCGA
TCTAACGGTAACAGTTCCGGTCTCGACTTCCTTAGGACCCACAACCGCCATCAACGGGATCTTCTGCGTCTCTGCGTTTCTTATGA
GCTTTGGCAACCTCTCTCCATGGCACAACTCAGCCCTCACTCCACAAGCTCTCAGCTTCTTACTCACTTCCTTGCAGAACTCCAAC
TGATTGTCTGTGACGGGCAGAACCCGAACTTGAACAGGAGAGAGCCACAATGGAAAATCCCCTGCGTAGTGTTCAATGAGAACCCC
AAAAAATCTTTCCAAAGAGCCCAAAACCGCCCTGTGGATCATTATAGGACGTTTCTTATCCGAGTTTGTGTCCACATAAGTAATGT
CAAACCTCTGAGGAAGATTAAAGTCAACCTGTATGGTTGAGCACTGCCACTTTCTTCCCAATGCATCTTCGATCTTAAGATCAATC
TTTGGTCCATAAAAGGCGCCACCTCCTTCATCAACCTCATAGCTCCATCCCTTATCATCTAAAGCATCCTTAAGAGCACACGTTGC
CTTTTCCCATATATCATCACTTCCAACTGACTTTTCAGGTCTAGTTGATAAGTTAACCTCATACTTATCGAACCCAAACCTAGACA
TATCTCTTCCGTGAGATCCATACACCTCTGATCTCGTCTTTGATCTGATCTCTAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885774 hypothetical protein ARALYDRAFT_319286 [Arabidopsis lyrata subsp. lyrata] | 1190 | 2e-128 |
| NP_671778 putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] | 1185 | 8e-128 |
| BAD94986 putative protein [Arabidopsis thaliana] | 1182 | 2e-127 |
| XP_002320505 predicted protein [Populus trichocarpa] | 1026 | 2e-109 |
| XP_002270988 PREDICTED: hypothetical protein [Vitis vinifera] | 1026 | 2e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0I902 Threonyl-tRNA synthetase | 713 | 2e-074 |
| Q3AKU0 Threonyl-tRNA synthetase | 707 | 1e-073 |
| A5GJT7 Threonyl-tRNA synthetase | 704 | 2e-073 |
| Q3AYC6 Threonyl-tRNA synthetase | 704 | 2e-073 |
| B8GRI1 Threonyl-tRNA synthetase | 700 | 6e-073 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q56XW1 Putative uncharacterized protein At2g04842 | 1182 | 1e-127 |
| B9IAN8 Predicted protein | 1026 | 2e-109 |
| C5XD23 Putative uncharacterized protein Sb02g037830 | 998 | 3e-106 |
| Q6ER90 Os02g0538000 protein | 995 | 6e-106 |
| B8AJF3 Putative uncharacterized protein | 992 | 1e-105 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G04842.1 EMB2761 (EMBRYO DEFECTIVE 2761); ATP binding / aminoacyl-tRNA ligase/ ligase, forming aminoacyl-tRNA and related compounds / nucleotide binding / threonine-tRNA ligase | 1186 | 3e-130 |
| AT5G26830.1 threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS) | 461 | 3e-046 |
| AT1G17960.1 threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative | 447 | 1e-044 |
| AT1G18130.1 tRNA synthetase-related / tRNA ligase-related | 198 | 9e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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