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Information for unigene UN18680
| FASTA Sequence |
| Unigene ID: UN18680 | Length: 826 |
| SNP | GGGTGTCCTCCACTATATAGCATGTTTAGAGAGATCGATATTACTGGGCAGCCGCACAGCACGAGAAGAAAACGTTGATCCAATTC
CCAACAGGAATTTGCGAATCTTATCTCAACCAAGCAGTTAATTGATCTCTTCTTAGTGTTACCATGCCGAAGAACAAGGGAAAGGG
AGGAAAGAACAGGAAGAGAGGAAAGAATGAAGCGGATGACGAGAAGCGAGAGCTTATATTCAAGGAAGATGGACAAGAATACGCTC
AAGTCCTTCGTATGCTTGGTAATGGAAGATGTGAATGTATGTGCATCGATGGCACTAAACGCCTCTGCCATATCCGTGGTAAAATG
CACAAGAAGGTTTGGATTGCAGCAGGTGACATCATACTTGTTGGTCTGAGAGACTACCAAGATGACAAAGCGGATGTCATCCTCAA
GTACATGTCTGATGAGGCCAGGCTTCTCAAGGCGTATGGTGAGCTTCCAGAGAATACTCGTCTTAACGAAGGAATTGTTGGTGATC
TTGAAGAAGATGAGGAAAATCTGGCCGAAGACTATGTTGAGTTTGAGGATGAGGATATCGATAGGATCTAAAGTGTTGTTTGGCAT
TTCTTTACCGTTTCCGTTTGTATTTTCAATTTGACACGCATGAATTCTGAGTTTAAGAAGAAACTGGTGGTAAAACATTATATGTG
TTTTGTTCTTGTTGCATTATTTTCTTGTCACATTCTGTTGTAGTGATGCTGGTTATAATTGGAAACTGAACAGAAAAAGATGTAAG
ATCACATCGAAAGGTTGATTAAGCCATTTGTTTGCTTGCTTGCAGCAAGTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885759 hypothetical protein ARALYDRAFT_899257 [Arabidopsis lyrata subsp. lyrata] | 735 | 1e-075 |
| XP_002870440 hypothetical protein ARALYDRAFT_915692 [Arabidopsis lyrata subsp. lyrata] | 734 | 1e-075 |
| NP_178531 OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] | 733 | 2e-075 |
| AAK55703 At2g04520/T1O3.7 [Arabidopsis thaliana] | 732 | 2e-075 |
| NP_198418 Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana] | 721 | 4e-074 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P56331 Eukaryotic translation initiation factor 1A | 670 | 2e-069 |
| P47815 Eukaryotic translation initiation factor 1A | 641 | 4e-066 |
| P47813 Eukaryotic translation initiation factor 1A, X-chromosomal | 525 | 1e-052 |
| Q8BMJ3 Eukaryotic translation initiation factor 1A, X-chromosomal | 525 | 1e-052 |
| Q5RA42 Eukaryotic translation initiation factor 1A, X-chromosomal | 525 | 1e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SJB9 Putative translation initiation factor eIF-1A | 733 | 1e-075 |
| Q93VF1 At2g04520/T1O3.7 | 732 | 2e-075 |
| Q9FKI2 Putative translation initiation factor eIF-1A | 721 | 3e-074 |
| A5BQH0 Putative uncharacterized protein | 710 | 6e-073 |
| A9NLE4 Putative uncharacterized protein | 709 | 7e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G04520.1 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative | 734 | 6e-078 |
| AT5G35680.1 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative | 722 | 1e-076 |
| AT5G35680.2 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative | 722 | 1e-076 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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