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Information for unigene UN19345
| FASTA Sequence |
| Unigene ID: UN19345 | Length: 1217 |
| SNP | ATCTCTCTTTCTCTCTCCCTTCTCCCCTCCGACAAAATCTCCGATCACCGACAAAAATGGGCGCTGAGGCAAACGCATCCTTCAAC
TTCCTAATCTACGGCCGAACCGGATGGATCGGCGGACTACTCGGCAAGCTCTGCGAGTCCCAGGGAATCTCCTACACTTACGGATC
CGGTCGGCTCCAAGACCGTCAATCCATCGTCTCCGACATCGAGACCGTGAAGCCTAGCCACGTGTTCAACGCCGCCGGAGTCACCG
GACGTCCCAACGTCGACTGGTGCGAGTCCCACAAGGTCGAGACCATCCGCACGAACGTCGCCGGGACATTGACTCTCGCCGACATT
TGCAGAGAGAAAGGACTCGTTCTGATCAACTACGCCACCGGTTGTATATTCGAGTACGATGCGGGTCATACTCTCGGGTCGGGTGT
CGGATTCAAGGAGGAGGATACCCCTAACTTCACCGGGTCTTTCTACTCCAAGACCAAAGCTATGGTGGAGGAGCTGCTCAAGAACT
ATGAAAACGTATGCACGCTAAGAGTGCGGATGCCCATCTCTTCTGATCTATCAAACCCAAGAAACTTCATCACCAAGATTGCTCGG
TACGAGAAAGTCGTTGACATCCCAAACTCCATGACCATCCTCGACGAGCTCCTTCCCATATCGATCGAGATGGCAAAGAGGAACTT
AACCGGGATCTACAACTTCACAAACCCGGGTGTCGTGAGCCACAACGAGATCTTGGAGATGTACAGAGAGTACATTGACCCGAGCT
TCACCTGGAAGAACTTCACGTTGGAGGAACAAGCTAAAGTGATTGTGGCTCCAAGGAGTAACAACGAGCTCGATGCCACTAAGTTG
AAGACTGAGTTCCCTGAGATGTTGTCTATCAAAGAATCTCTGATCAAGTTTGTGTTTGAGCCAAACAAGAAGACTGGAGTTAAAGC
TTAAGATGCTGCCAAAGTGTGTTCTTTGTTAAGGTAACGGTCCTAAACACTAAAAACAAATATCAAACCAAAACAAAGTTGTTGGG
GGTTTTTATAAATTTTAGTGTTTATGATGGCCTAAAGAAATTGTTGTGTTTTTTTGTATTTTCTTGTTTCCTTCATCCAATGTTGT
TGTATTGTTTAAATAAACCTTTTTGTTACAAATAAAAATGTATCGTTTGCATTTTCCTTGTCCTTTAAGTTAAAATAATTATATTA
AGCTTTGTTAATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887985 hypothetical protein ARALYDRAFT_893174 [Arabidopsis lyrata subsp. lyrata] | 1478 | 1e-161 |
| AAM65668 unknown [Arabidopsis thaliana] | 1472 | 7e-161 |
| NP_564806 3,5-epimerase/4-reductase [Arabidopsis thaliana] | 1470 | 1e-160 |
| AAK62450 Unknown protein [Arabidopsis thaliana] | 1469 | 2e-160 |
| ADB24764 UDP-L-rhamnose synthase [Gossypium hirsutum] | 1366 | 1e-148 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SYM5 Probable rhamnose biosynthetic enzyme 1 | 1284 | 2e-140 |
| Q9LH76 Probable rhamnose biosynthetic enzyme 3 | 1273 | 3e-139 |
| Q9LPG6 Probable rhamnose biosynthetic enzyme 2 | 1255 | 4e-137 |
| Q5UPS5 Uncharacterized protein L780 | 545 | 9e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L9Z8 Putative uncharacterized protein | 1472 | 5e-161 |
| Q9LQ04 3,5-epimerase/4-reductase | 1470 | 8e-161 |
| Q94EZ7 Putative uncharacterized protein F16P17.17 | 1469 | 1e-160 |
| D2WK23 UDP-L-rhamnose synthase | 1366 | 9e-149 |
| D2D2Z3 UDP-L-rhamnose synthase | 1362 | 3e-148 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G63000.1 NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/ UDP-4-keto-rhamnose-4-keto-reductase/ dTDP-4-dehydrorhamnose 3,5-epimerase/ dTDP-4-dehydrorhamnose reductase | 1471 | 3e-163 |
| AT1G78570.1 RHM1 (RHAMNOSE BIOSYNTHESIS 1); UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic | 1284 | 2e-141 |
| AT3G14790.1 RHM3 (RHAMNOSE BIOSYNTHESIS 3); UDP-L-rhamnose synthase/ catalytic | 1273 | 3e-140 |
| AT1G53500.1 MUM4 (MUCILAGE-MODIFIED 4); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/ UDP-4-keto-rhamnose-4-keto-reductase/ UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic | 1255 | 4e-138 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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